Solenopsis invicta (red fire ant): 105204802
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Entry
105204802 CDS
T03916
Name
(RefSeq) LOW QUALITY PROTEIN: cactin
KO
K25058
cactin
Organism
soc
Solenopsis invicta (red fire ant)
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
soc03041
]
105204802
Spliceosome [BR:
soc03041
]
Complex C
Other components
Complex C specific factors
105204802
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Cactin_mid
CactinC_cactus
zf-C2HC_2
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
105204802
NCBI-ProteinID:
XP_039314177
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Position
16:complement(6116442..6128600)
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AA seq
1364 aa
AA seq
DB search
MEKYSRERNRHGSRKERDDDCRNKDRRVRDRAEYRSEGSNSRHERSDTRSRERHRKSRDD
DSHSRRESRKSSKRKSKKRESSSTDSSMSSNGSSTDSSSDSTKLLEKLQKQRQKQIEDRK
HQKEVMKATETPEEKRLRRLKKKEAKERKRKERMGWDNDYLHYTNTDNPFGDGNILSTFV
WSKKLGKEGLLGAGREELEIRNRHKQEETKRELEKVKKRRQERELERQQREEEMTMLQRG
KEAAQLEQWARQEDQFHLEQARLRSRIRIQDGRAKPIDLLAKYISAEEEVDAVEMHEPYT
YLRGLQVKDLEDLIEDIKVYKELERGKNLDYWNDITVIVEDELHKLRKLERTEYEVAVGR
REGIHESVAKDVTAIFKGKTAAQLEALQLQIQAKITGKPEGVDIGYWESLLSQLKAHMAR
ARLRDRHQENLRKKLEVLIAEQGVARAENEAESSQAQESESTVRQDEPSSSTAAEKNENS
HSDDDQEETNAANDLLSESFREYETGGYSPTYISYSQLEPGTLITQEDEDNQRLEYARKQ
VLSTGRKIQNVLTTEEQAMHREARKGMGSDEAQFSVESSLEAQIYLWSDKYRPRKPRYFN
RVHTGFEWNKYNQTHYDMDNPPPKIVQGYKFNIFYPDLIDKNTTPEYFLTPCADNKDFAI
LRFHAGPPYEDIAFKIVNREWEYSYKRASDVNFITTSFNCGFISRDIDIAVNVAHFIPVI
CEDHDIDKIIMKWKRGPCEFLSQKTFLIIKDDLDISEGTTKTTDGKKTATKNATHIGTWP
PKMKRVQFCEEEPERPKTANLRRPSVLDPALVDKLDMSLLSKELLYDSMTRIQSATLGKP
ASGGTTSSSSSSSLSLLLPSPPSQTRRRQSAAVNIATTTTTWSSHDVAPVRRQRRSFEQM
YDPRVATGQMEEINGSRSSSGSQKATSPIATAIQEHASSRRNSDIRRLDDNNNKNNPPKV
LSSVKKKNSRTGLSNDLEIFTATSVKKDAPEPCKTCGRPDQPERFHSHPKGSQKIKDIPI
STTKPKPAVPPVPKSIQKPVALNFRSDRNKNKLDETKSDPQNNLSQDSDQQGRLVSAPMK
RGPKAITCYVCGREFGTASFPIHEPRCMEKWERENNSLPPSQRRPKPQRPAVGIEHNDWN
ATAWEQSQEQLVPCAKCGRTFLPDRLPIHERSCKATPKNNDRLATATLANARNGPRTVPC
RVCGRKFGTRSIKIHEPQCNRRWQAQNDSNQQENPALYRETADSGQGNLPPMYPDLSQKK
TVTCYICGRDFGSSSITIHEPQCLKKWHAENDKLSPARRRKEPQKPEIIYTQDSNTGNMV
VDQAATAEANWMTHLSQLVPCKHCGRTFNPDRVNIHENSCKGSR
NT seq
4095 nt
NT seq
+upstream
nt +downstream
nt
atggagaagtactcacgcgaacgcaacagacatggttcgaggaaagagcgtgatgacgat
tgcaggaacaaggaccgaagagtccgtgatcgcgcggagtatcgatccgaaggttcgaac
tccagacacgagcgttcagacacaagatcccgcgaaaggcacagaaaatcgagggacgac
gactctcattcgcgtcgcgagtcgcggaagtcttccaagcgtaagagcaaaaagagggag
tcatcttcgacggactcgagtatgtcctccaatggctcgtccacagactcgtcctcggat
tccacaaaattactggaaaagttacagaagcaacggcagaagcagatagaggaccgcaaa
catcagaaggaagttatgaaggcaacggagacgccagaagaaaagcgcttacgtcgcttg
aagaagaaagaggccaaggaacgtaagcgtaaggagaggatgggttgggacaatgactat
ttacactatacaaatacagacaatccatttggagatggcaatatcttgtctaccttcgta
tggtcgaagaagttgggaaaggagggcctgcttggcgcaggcagggaggagttagagatt
cgtaacaggcacaagcaggaggagaccaagagggagctagaaaaggtgaaaaagaggcgg
caggagagagaattggagcggcagcaaagggaagaggaaatgaccatgttgcagagaggc
aaggaagctgcccagttggagcagtgggcccggcaggaagatcagtttcacctcgaacag
gccagactgagatcccgtatcaggatccaggatggccgcgcaaaacctattgaccttctc
gcgaaatacatcagtgcggaagaagaggttgatgcagtagagatgcacgaaccatacaca
tacttacgaggtctgcaagtgaaggacttggaggatctcatagaggacataaaggtttat
aaggaactggagaggggcaaaaatttagattactggaatgacataactgtaattgtggag
gacgaattgcataaacttaggaaattggaacgaacagaatatgaagttgctgttggtaga
agagaagggattcatgagtcagtagccaaagatgtcacggccatttttaagggtaaaacc
gcggcgcaattggaagctttgcaattgcagattcaggcaaaaataacagggaaaccggaa
ggcgtcgatatcggatattgggaaagccttttgtctcagttaaaagctcatatggcaagg
gcgcggctcagagatcgacatcaggaaaacttacggaaaaagttggaagttctgattgcc
gagcaaggcgtagctagagcggagaacgaggcagagagttcgcaagcacaggaaagcgag
tctactgtgaggcaagatgagccttcctccagcacagctgccgagaagaacgaaaacagt
cattccgacgatgatcaagaagagacgaacgctgccaatgatttgttgtccgaatccttc
cgcgagtacgaaactggcggttattcgccgacttacatatcctactcgcagctcgaaccg
ggcacgctcatcacacaggaagacgaggacaatcagaggttggagtacgcgaggaagcaa
gtcctcagtaccggcaggaagattcagaatgtgttgacgactgaggagcaagctatgcac
cgggaagcgcgcaaaggcatgggctcagacgaggcgcagttcagtgttgagtcgtcgttg
gaggcgcagatctacctgtggtctgacaagtatcgaccgcgtaagccccgttactttaac
cgcgtgcacactggtttcgagtggaataaatacaatcagacgcactatgatatggacaat
ccgccgccgaagatcgtgcagggctacaaattcaacatcttctacccggacctcatcgat
aagaataccacgccggaatattttctcacgccctgcgccgataataaggactttgcaatc
ctgcgattccacgcgggtccgccttacgaggacatcgccttcaaaatcgtcaatcgagag
tgggagtattcgtataaacgtgcttcagatgtcaatttcataacaacatctttcaattgt
ggtttcatttcaagagatatagatatcgccgttaacgtggcacatttcatacccgtaatt
tgtgaagatcacgatatcgataagatcatcatgaagtggaaaagaggaccgtgtgagttt
ctatcgcagaaaacttttctgataatcaaggatgacttggatatttcggaaggtacgacc
aagacaacagacggcaagaaaacagcgacaaaaaatgcgacgcatatcggcacttggccg
ccgaagatgaagcgcgtgcagttctgtgaggaggagccggagaggccgaaaacggcgaat
ctcagaagaccgagcgtgctggaccccgcgctcgtggacaaactcgacatgtcgttgctc
agtaaggaattgctctacgactcgatgacgcgtattcagtcagccacattgggcaagccg
gccagtgggggcacgacatcgtcgtcgtcatcgtcgtcactgtctttgctgttgccatcg
ccgccgtcgcaaacacgaagacgccagagcgccgccgtcaacatcgcgacaacgaccact
acctggtcgtctcacgacgtggctccagtgcgtcgtcagcgacgaagcttcgagcagatg
tacgacccgcgggtcgcgacaggccaaatggaggagatcaatggatcgcgatcgtcctcg
ggaagtcaaaaggccacgtcgcccattgccaccgcgatacaggagcatgcgtcctccaga
cggaattccgatattagaagactcgacgataacaataataaaaacaatcctcccaaggtg
ctatcgtcggtgaaaaagaagaactcaaggactggtctatcgaatgacctggaaatattc
accgccacgtcggtgaaaaaagacgcgccggagccttgcaagacttgtggacgtccggat
cagccggagagatttcacagtcatccaaagggcagtcagaaaatcaaggatattccaata
tcgacgacgaaaccaaagcccgcggtgccgccggtaccaaagtccatccagaagccggtg
gcgttgaactttcgcagcgaccggaacaagaataaactggacgaaacgaagtcggatcct
cagaataatctctcccaagactcggatcagcaaggtagattggtgtccgcgccgatgaaa
cgaggtcccaaagctatcacgtgctatgtatgcggccgagaattcggtaccgccagcttt
cccatacacgagcccaggtgcatggagaaatgggagcgcgagaataattcgctgcctccg
tctcaaaggcggcccaagccgcaaagacccgcggtcggaatcgagcacaacgattggaac
gcaaccgcatgggagcagagtcaggagcaattagttccgtgtgcgaagtgtgggaggacg
tttttgccagaccgattgccgatccacgagagaagctgtaaagccacgcccaagaataac
gaccgactggccacggctacgttggcgaacgcgcgcaacggaccgcgtaccgttccctgt
cgcgtttgcggtcgaaaattcggtactagaagcattaagatacacgaacctcagtgcaac
aggcgatggcaagcgcagaacgattccaatcagcaggaaaatccagctctctacagggaa
acggccgatagtgggcagggaaatttaccaccaatgtatccggatttatcgcaaaagaaa
acagttacatgttacatctgtggccgagatttcggatcctccagcatcaccattcacgag
ccccagtgcttgaagaagtggcatgccgagaatgacaagctgtcgccggcgcgaagaaga
aaggagccgcaaaaacccgaaattatatatacacaggattccaatacgggaaacatggtg
gtcgaccaggcggcgacggcggaggccaactggatgacacatctgagccagctggtaccc
tgcaagcattgtggaagaacgttcaatcctgaccgtgtaaacattcacgagaatagttgc
aaagggagccgttaa
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