Solenopsis invicta (red fire ant): 105204813
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Entry
105204813 CDS
T03916
Name
(RefSeq) homeobox protein caupolican isoform X1
KO
K19383
homeobox protein TGIF1
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
105204813
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
soc03000
]
105204813
Transcription factors [BR:
soc03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
105204813
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
105204813
NCBI-ProteinID:
XP_011172328
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All DBs
Position
16:complement(6155680..6194205)
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AA seq
448 aa
AA seq
DB search
MSPTTARRASVQCPSRHVNHPHARHYVPYCNRRVARKASPVTDDEHISSEAENTSPRSSP
SVNRANRRVAVVQNTSGRRRRGNLPKESVETLKRWLSEHRFNAYPDEAEKLALSTQTNLT
VMQVCNWFINARRRLLPELLLQSGEDPNQYTISRRSRRMNSSGSGGSGPIQHSRLRQGRR
TPFEPIRGGRPGSCNIDVQRRDMKKSECSQSEEYPNEYESSPNDYRVDSEEEHSIRWPNV
IVRPYGEAHFEEIGGERICQPYVRRRCSHSSDGISEHTYEEPAGYWSAPREHLSASPIFQ
QHIALRGLTQQSLENAYFHEQNGDGLNMLAEVAVSYAQSIPSSPNQSVSSCSLPASSPPL
SSVSPISSPMEEPIPEETIEKQEETIASVEDIVAPVEEAVASFNTAASVHTVASVHTVAS
VHTVASIETEIIAPVEETVSPIEETILN
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcctacaaccgcccgtagagcttcggtccagtgtcccagccgtcacgtaaatcat
cctcacgcgagacattatgtgccttactgcaatcgacgcgtcgcacgaaaagcgtctccc
gtcactgatgatgaacacatatcatcggaagcggagaatacgtcaccacgttcatctcct
agtgtaaatcgtgccaatcgacgcgtcgctgtcgtccaaaatacctctggaaggagacgt
cgcggtaacctgccgaaggaatcggtggaaaccttaaaacgttggctcagtgaacaccgt
ttcaacgcttatccggacgaggctgagaaattggctctcagtacgcagaccaatctaaca
gtcatgcaagtgtgtaactggttcataaatgccaggcgtcgcctcctccctgaactcttg
ctacaatccggcgaagatccaaatcaatatactatctcgcgccgttcccgtcgcatgaac
tccagcggcagtggcggttccggtcccattcagcatagtcgccttcggcaaggacgaaga
acacctttcgagccgattagaggcggtagaccaggatcatgtaatatagatgtgcagcgt
cgcgatatgaaaaagtccgagtgtagtcaaagcgaggagtatccgaatgaatacgagagc
agtccgaacgactaccgagtcgacagcgaggaggaacattcgatacgatggcctaacgta
atcgttcgtccctatggcgaggctcatttcgaggaaataggcggcgaacgtatttgtcaa
ccgtatgttcgacgaaggtgcagccattcatccgacggaatttctgaacacacttacgaa
gaacctgctggttattggagcgctcctcgcgaacacctatcagcgtcgcctatttttcaa
cagcacatagcgcttcgtggcttgacacaacaaagtcttgaaaatgcttattttcatgaa
caaaatggtgatggcttgaatatgctcgccgaagttgctgtatcctacgctcaatctatt
ccgtcttcaccaaaccaatcagtgtcgtcatgctccttgccagcttcatcaccacctttg
tcttccgtgtcgccgatctcttcaccaatggaagagcctattccggaagagactattgaa
aagcaggaagagactatcgcatcagtagaagacattgtggcaccagtagaagaagctgtt
gcatcatttaataccgctgcatcggttcataccgttgcatcggttcacactgttgcatca
gttcacactgttgcatcaatcgagactgaaattattgcaccagtagaagagactgtttca
ccaattgaggagaccatcttaaactag
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