KEGG   Solenopsis invicta (red fire ant): 105205121
Entry
105205121         CDS       T03916                                 
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1 isoform X1
  KO
K02999  DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6]
Organism
soc  Solenopsis invicta (red fire ant)
Pathway
soc03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:soc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    105205121
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:soc03021]
    105205121
Enzymes [BR:soc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     105205121
Transcription machinery [BR:soc03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Core subunits
     105205121
SSDB
Motif
Pfam: RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_1 RNA_pol_Rpb1_4 DUF7695
Other DBs
NCBI-GeneID: 105205121
NCBI-ProteinID: XP_011172718
LinkDB
Position
2:complement(22447536..22500939)
AA seq 1693 aa
MMSKYHRPRLTPKHQDSQHLLFSVFTANDIRNLSVTKIRTPLCYNILGHPLKGGLYDPSL
GTTRNNSEICSTCGYNSSKCPGHFGHVELPVPVVNPLFHKALSMLLKLSCLSCFTLQVPP
YIKLLLSAKLKLLYQGHLNDLDILDQEVTSIISSTQKEEERTECIRNVIDNYMQNFFNRI
RYSQTELQDYENQANVKNIIMQWHVYVESMLKQYVRNNKAGICVNCHDGLPKISTLQNKI
MISNKKVASPRATLAHKLETVMIMPDQSKEYLRRLWENERDFLKIIVPCLELVDIEYPTD
VFFFEVIPVLPPIVRPVNFLNGQMIEHPQTYIYKSIIQDCLVLRNIIQTIQDGGTDHLPQ
EGRLVFEQIKGITPIEKLHNAWQALQHDVNHLMDRDMNKTPESINGQGLKQILEKKEGII
RMHMMGKRVNFAARSVITPDPDLNIDEIGIPEAFACKLTYPTAITPWNVVELRQLVLNGP
DVHPGAVMVENEDGSIQAISSRDSTQREAIAKRLLTTSDRTNESFAGVKVVHRHLQNGDV
LLINRQPTLHKPSIMAHKARVLKGEKTLHLHYANCKAYNADFDGDELNAHFPQNELARSE
SYNIANVSNQYLVPKDGTPLSGLIQDYMVSGVRLTTRGRFFSKTHYTQLVYIALTQDNII
LLPPAIVKPKMLWSGKQILSTVMINIIPSHKARINLISSTKISAKEWQTETPRHWKCGTE
FKNLTTMSETEVIIRHGELLCGVLDKIHYGATPYGLIHCIYELYGGICASKMLSAFGKLF
RMFLQCDGFTLGVEDILITRKIDEKRKEIISNCRKVGETIQRSMVKVSNDAPMNEIQAKM
EESYWNNSKFRAQVDHKYKSALDVYTNDINKVCLLTGLLKKFPNNNLQLMVQSGAKGSTV
NTMQISCLLGQSELEGKRPPLMISGKSLSSFPAYDPTPRAGGFIDGRFMTGIRPQECFFH
CMAGREGLIDTAVKTSRSGYLQRCLVKHLEGLIVNYDATVRDYDGSLIQFYYGEDGLDIP
GSRFLKKEQMEFLVDNKDAIIDTKLLQCLKTDNEEIMKTMKKIKKWESKNGSSLRKRRIN
EFSKFSMENFDQSNNAKRKSIDSHSGRSKAAMSLMKKWMRATTEVKESFRVQCAKCPDPV
MSKYRHDVEFGVLSERIEDLIDGYLSRSSTIKKSILRDLLSIKVMKTICPPGEPVGLLAA
QSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMMASRNIKTPSMEIPFQNNLQNLE
KQAKRLRLRLKKCVLSDVLKNISINRRMEESPHRRLVHTITIKYLSHKYYKEEFSVHPRD
VIRCTEEIFFKNVFREIKKFAKVSKVLMHFEGEKKRVNDEDAAIDQIDPDEVPENTGNKT
RMDLGEMHESSDEEQAAEDADATMTKSLLRHRENQEYEDPEDEEEIDDIVNDKEEEADDD
NNANRIFKNEGEEDDDDNISKLSNRKSNKFTNRKDWVLHTYDYAMDYDYDESKLSWCKFT
FWLPLKTIRLDLPTIIKNAASKSVVWETPCIKKAFTFQNSKDETILKTDGLNIMEMFKYD
NILDLNRLYSNDIYNISQTYGIEAANRVIVREIRDVFKMYGITVDSRHLSLIADYMTFDG
TFKPLSRKGMENSASPLQQISFESSLGFLKTATLQGKKDDILSPSSRLMLGQPCKSGTGA
FSILPSLYNMEKQ
NT seq 5082 nt   +upstreamnt  +downstreamnt
atgatgagtaaataccataggccacgtttaacacccaaacatcaggattcccaacattta
ctgttttcagtcttcacggcgaatgatataaggaacttaagtgtaacgaaaatcagaaca
ccattatgttataacattcttggacatccattaaagggtggattatacgacccatcttta
ggtacaacgagaaacaattcagagatttgcagcacctgtggatacaacagttctaaatgt
ccaggtcactttggtcatgtagaattgccagtacccgttgtcaatccattatttcacaaa
gcattgtccatgctactgaaattgtcatgtttaagttgctttacgttacaagtaccgccg
tacatcaaattactgctatctgcaaaattaaagttactttatcaaggacacctcaatgat
ctcgacatcttggaccaagaagtaacatccataatatcgagtactcaaaaagaggaggaa
cgaacagagtgcattcgcaacgtaatcgataattacatgcagaactttttcaatagaatc
agatacagtcaaaccgaacttcaggattacgagaatcaagccaatgtaaagaacattatt
atgcaatggcacgtgtatgtcgaaagtatgctcaagcaatacgtgagaaacaacaaagct
gggatatgcgtaaactgtcacgatggtctaccgaagatttcgacgctacagaataagata
atgataagcaataagaaggtcgcatcccctagagcgacgcttgcgcacaaattggaaact
gtaatgatcatgccggatcaatctaaggaatatctacggcgattgtgggaaaacgaaaga
gattttctcaaaataattgtaccatgcttagaattggtagacatcgagtatcctactgat
gtgtttttctttgaagtaatacccgtgttaccaccgatcgtgcgtccagtaaattttctt
aatggtcaaatgatcgaacatccccagacctacatttacaaaagcatcatacaagattgt
ctagttttgagaaatatcatacaaacgatccaggatggaggtaccgatcatttgcctcag
gaaggtcgattagtctttgaacagataaaaggaatcacgccaatcgaaaagctgcacaat
gcttggcaggcattgcagcatgacgtgaatcacttaatggatcgtgacatgaacaaaact
cccgaatccatcaatggtcaaggcttaaagcaaattcttgaaaaaaaggagggtatcatt
aggatgcacatgatgggtaagagggtaaattttgccgcgcgctcggttattactcctgat
cctgatttgaatattgacgagattggcattcctgaagcttttgcttgcaaattgacgtac
cctacagctataacaccgtggaatgtcgttgaattgagacaattggtcttgaatggtccc
gatgttcatcctggcgcggttatggtagagaacgaagatggctcaatacaagctattagt
agtcgcgattctacacaaagagaagctatcgcgaagcgcctcttgacgacgagtgacaga
accaatgagtcctttgccggcgttaaagtggttcaccggcatcttcaaaatggtgatgta
ttgctgataaatagacaaccgacgttgcacaaaccgagtataatggctcacaaggcacgc
gttcttaagggagagaaaacattgcatcttcattatgcaaattgtaaagcatacaacgca
gactttgatggcgatgagctcaatgctcactttccgcaaaatgagctggccagaagtgaa
agttacaacatagctaatgtatccaatcagtatcttgtgccgaaagacggaactccattg
agcggccttatacaggattatatggtatctggagtgcgattgactaccagaggtagattc
ttttcgaagacgcactatacgcaattggtttatattgcgttaacacaagataatataatt
cttctgccgccggctatcgttaaaccgaaaatgctgtggtcgggtaaacaaatcctttcg
acagtcatgattaatatcattccttcgcataaggcgcgaattaatttgatctccagcacg
aagattagcgccaaggaatggcagacagagacgccgcgacattggaaatgcggaacggaa
tttaaaaatctgacaactatgtcggagactgaagttataattcgacacggggaattgttg
tgtggagtgctcgataaaatacactacggcgcaacaccctatggtcttattcattgtatt
tacgaattgtacgggggaatatgtgcgagcaaaatgctgagcgcatttggtaagctgttt
cggatgtttctgcaatgcgatggattcactctcggcgttgaggacattctgataactcgt
aagatcgacgaaaaacgcaaagagatcatttctaactgtagaaaagttggggaaactata
caaaggtctatggtaaaagtatccaatgacgcgcctatgaacgaaattcaagctaaaatg
gaggaatcttactggaataattcgaaatttcgcgcacaagttgatcacaagtataagagc
gctttagacgtttacaccaacgacattaacaaggtgtgtcttctaacgggtctcctcaaa
aagttccctaacaacaatttgcagctcatggtacaatctggcgcgaagggatccacggtt
aataccatgcagatatcgtgtctgctcggccaaagtgaattggaaggcaagaggcctcca
ttaatgatcagtgggaaaagtttgtcgagttttccggcgtacgatccaacacccagagct
ggcggcttcatcgacggtagattcatgactggcattagacctcaggagtgttttttccat
tgtatggcgggacgcgagggtctcattgacacagccgtgaagaccagtagatctggttat
ttacagaggtgtttagtcaagcatctggaaggtctgattgtcaattacgacgcgacagtc
agagactacgatggcagcctgattcagttttattacggagaggatggtctcgatataccg
ggctcacgttttctaaaaaaagaacaaatggaatttctagttgacaataaagatgctatt
atagacacaaaattattgcagtgcctaaaaactgataatgaagaaattatgaagacgatg
aaaaaaatcaagaaatgggaaagtaaaaatggttcctccttgcggaagaggagaatcaac
gagtttagtaaattttctatggagaattttgatcagagtaataatgcgaaacgaaaaagc
attgatagtcatagcggaagaagcaaagccgcgatgtcacttatgaagaagtggatgagg
gcaacgacagaagtaaaagaatcatttcgcgtgcagtgtgccaaatgtcccgatccagta
atgtcgaagtacaggcatgacgttgaatttggtgtattatctgaacggatagaagactta
atagacggatacctctcccgttcatcgacaattaagaaatccattttgagagatctacta
tctataaaagttatgaagacaatttgcccacctggtgagccggttggtctattagccgcc
caatccataggcgaaccgtccactcaaatgaccttgaataccttccacttcgcgggacgt
ggagagatgaacgtgacgttgggtattccgagattacgtgaaatcctgatgatggcatca
agaaacataaaaactccgagtatggaaataccctttcaaaataacttgcagaatcttgag
aagcaagcaaaaaggctaagattaagattgaaaaagtgcgtgttaagtgatgtgttgaaa
aacatctcgataaacaggagaatggaagagagcccgcacagaagattggtacacactata
acaatcaaatatctttctcacaaatattacaaggaagagttctccgttcatccgcgggat
gtgattagatgtaccgaggagatcttttttaaaaatgtgttcagggagattaagaagttt
gccaaagtgtcgaaagttttaatgcatttcgaaggggagaagaaacgggtgaacgatgaa
gacgcggcgatagatcagattgatcctgacgaggtgccggagaacaccggaaacaagacg
cgaatggatttgggagagatgcacgagtcatccgacgaggagcaggctgcagaagacgct
gatgcgacgatgacaaaatcattactgcgtcatcgagagaatcaagaatatgaggatccc
gaagatgaggaagaaattgatgatattgtgaatgataaagaggaagaggcggatgatgat
aataatgcaaatagaattttcaagaatgagggcgaggaagacgatgacgacaatattagc
aagttgagtaatagaaaaagtaacaaatttactaacaggaaagattgggtcttacataca
tatgactatgctatggattatgattatgacgagagtaaattgtcatggtgtaaatttacc
ttttggttaccactcaaaactatcagattagatttaccaacaataattaagaatgccgct
agcaaatctgttgtatgggaaacaccatgcatcaagaaagcttttacatttcaaaacagc
aaagatgaaacgattctcaaaacggatggtttaaatataatggaaatgttcaaatatgat
aatattcttgatttaaatagattatattctaatgacatttataatatttctcaaacatat
ggaattgaagccgcaaatagggtcattgtgagagaaatcagggacgtttttaaaatgtat
ggcatcaccgttgactctaggcatctgtccttgatcgcagattatatgacctttgatggc
acgttcaaaccactcagtcgaaaaggaatggagaattccgcttccccgttgcaacaaata
agttttgaaagctcactaggttttttgaaaacagcgacgttgcaagggaaaaaggatgat
atattgtcaccttcgagcagattgatgttaggacaaccgtgcaaatctggaactggagca
ttttctattttaccatcattatacaatatggaaaaacaataa

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