Solenopsis invicta (red fire ant): 105205183
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Entry
105205183 CDS
T03916
Name
(RefSeq) CCR4-NOT transcription complex subunit 2
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105205183
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soc03019
]
105205183
Messenger RNA biogenesis [BR:
soc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105205183
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
105205183
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
105205183
NCBI-ProteinID:
XP_011172774
LinkDB
All DBs
Position
6:101818..110346
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AA seq
462 aa
AA seq
DB search
MANLNFEQPPRSIANASLTSRAAGGGGGSLSSVALGGHVTPTSGMFSGSSANTSNTANSA
IVTTNVYPGVSASSSGQNSHQQQQQLSPMGSRGLFGQRAFTDRRTMPALGASNPMGSMGS
FGIPPSRNYGSQGAVNNFHSVFGSGGGGDTSTPPLLDLSEFPSLTNRGQGDSMPQPSPMP
GKQPYVGMVKQPTSESSEFTMSSEDFPALPGTQNREGPSPGGSMSGDKNISVGLGPEIGQ
DVLQANRAPGSEKSQSSKRGIQTSPDGKVTNIPASMVKDQFGMVGLLTFIRAAETDPNLV
SLALGQDLTALGLNLNSPENLYQNFGGPWAETPCRPQDIDFHVPPEYLINAAIRDKLAPV
KLNRYKDDLLFYMFYTNVGDVLQLAAAAELYSREWRYHMEEKVWITQAPGLGIVEKTSTY
ERGTYYYFDAQNWRKVAKEFHLDYAKLESRPHLPSNFHQTQP
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggccaacctgaactttgaacaacctccacgcagtattgcgaacgcaagtctcacttca
cgtgcagctggcggcggtggagggagtttgagcagtgtggccctcgggggtcatgtcacg
cctacctcgggcatgttctcaggctcgtctgcaaacacctcgaatacagccaactcggcg
atagtcaccaccaacgtttatcccggagtgtcggcttctagcagtggacagaacagtcat
caacagcagcagcaactctctcctatgggcagtagaggactgtttggacagagagctttt
accgatagacgtacgatgcctgctcttggagcctcaaatccaatgggtagtatgggcagt
ttcggaatacctccaagtcgcaattacggatctcaaggagcggttaacaatttccactct
gtttttgggagtggaggtggtggagatacgagtactccacccttgttagatctctcggag
tttccctccttaacgaacagaggtcaaggtgattccatgccgcaacctagtcccatgcca
gggaaacagccttatgttggaatggtgaagcagccaacatccgagtcaagtgaatttact
atgagctcggaggactttcccgcattaccgggaacgcaaaatcgagaaggtccgtcaccc
ggcggcagcatgtctggtgataagaatatatctgtaggactcggtccagaaattggacaa
gatgtgctgcaagccaacagagcgcctggatctgaaaaatctcagtcttctaaaagaggc
attcaaacatcgcctgatggcaaggtgacgaacatacctgcgagtatggtaaaggatcaa
ttcggcatggttggacttttgacgtttattagagcggcggagacagatccgaacttggtg
tcgctagcgttaggtcaagatcttactgcgttaggactgaatttgaattcgccagaaaat
ctttatcagaattttggtggcccctgggcggaaactccatgtcgaccgcaggatatagat
tttcacgtaccaccagagtatcttataaatgccgcaatcagggataagctagcgccagtt
aaactaaatcgatataaagatgatctactgttttatatgttttatacaaatgttggggat
gtattgcaattagctgctgcagcggaactgtacagcagagaatggcgatatcatatggaa
gaaaaagtatggataacgcaggcgccaggtttgggaattgtagaaaagacgtcgacatac
gaacgtggtacttattattattttgatgcgcaaaactggagaaaggtagctaaggaattc
catttggattatgcaaaactagaaagtagacctcatcttccttcgaactttcaccaaact
cagccttga
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