Solenopsis invicta (red fire ant): 105205210
Help
Entry
105205210 CDS
T03916
Name
(RefSeq) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105205210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
soc03000
]
105205210
03021 Transcription machinery [BR:
soc03021
]
105205210
Transcription factors [BR:
soc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
105205210
Transcription machinery [BR:
soc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
105205210
RNA polymerase III system
TFIIIB
105205210
RNA polymerase I system
SL1/TIF-1B
105205210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-GeneID:
105205210
NCBI-ProteinID:
XP_011172810
LinkDB
All DBs
Position
3:27810919..27815453
Genome browser
AA seq
306 aa
AA seq
DB search
MDQMLPSPGFSIPSIGTPLHQPEEDQQILPNALQQQQQSQQFQQLQQLHSMSPNMQSGML
MITTPQKNIHTYAPTPTFATPQSLMQPQTPQNMMSPIVPQNNQIAPPSIGPATPGPMTPM
TPASADPGILPQLQNIVSTVNLSCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTAL
IFSSGKMVCTGAKSEGDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEG
LVLSHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRTEIYEAFDNIYPIL
KSFKKQ
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggatcagatgcttccgagccctggctttagcatacctagcatcggcactcctctgcat
cagccagaggaggatcagcagatcttgccgaatgccctgcagcagcagcaacagtcgcag
cagttccagcagctgcagcagctgcactcgatgagccccaacatgcagagtggcatgctg
atgattacgacgccgcagaagaatatacacacgtacgcgcctactcctacgttcgcgaca
ccgcagagtctcatgcaaccacaaacgccgcaaaatatgatgtctcctatagtaccacaa
aataatcaaatagcaccaccatcgataggacctgcgaccccaggaccaatgacaccaatg
accccagcttccgcggaccctggaatattgccacagttgcagaatattgtatctactgtt
aatttgagttgcaaactagatttgaaaaaaatagctcttcatgctagaaatgctgagtac
aatccaaaaaggttcgcggctgttatcatgcgaataagagaaccaagaactaccgcactg
atatttagcagcggtaaaatggtatgtactggcgccaagagcgaaggagattcacgtctt
gcagccagaaagtacgcaagaataattcagaagttaggttttccagcaaagttcctagat
tttaaaatccaaaatatggttggcagctgtgatgttaaatttccaattagattggaaggt
ttagtgctatctcacggacagttctcatcttacgaaccagaactatttccaggtctaatt
tataggatggtcaagcctcgaattgtattgctcatattcgtctcaggaaaagtagtattg
acaggtgcaaaggttcgcacggaaatttatgaagcctttgacaacatatatccaatattg
aagagctttaaaaaacaatga
DBGET
integrated database retrieval system