Solenopsis invicta (red fire ant): 105205384
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Entry
105205384 CDS
T03916
Name
(RefSeq) caprin homolog isoform X1
KO
K18743
caprin-1
Organism
soc
Solenopsis invicta (red fire ant)
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soc03019
]
105205384
Messenger RNA biogenesis [BR:
soc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
105205384
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_dimer
HD_assoc_2
Motif
Other DBs
NCBI-GeneID:
105205384
NCBI-ProteinID:
XP_011173042
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Position
3:18043785..18050049
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AA seq
654 aa
AA seq
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MPSANPKLEKQASTETVEPLRQAIIVIEHKIRNLEKRKGKLESYRDLQKNGRELNADQKT
AVAKYDEVLQTLDITRDLYKQIVNIANDAVKQQKKLARKEAVERMQQDIAKVKEVLLTQH
VLISINTDSVRDDFFHGKNGAIKLSEEEFKYLDSLYNEIIIKHQREEGDLTFAQQAQKVA
EHYVAIVDGKQREVIGTTYNKLKEIIAKINQCGYFDQVHECSEATPMEEIIETVTETNIT
NATQEQVNEEYSNGNDRHIPPESIIPIPNFPVQVTTLPVVSGAAPVSGPIPVVPQPMPPH
PAAPVDTPFYTNATNFVPQPQQQQQQQQQAQQSQQQPPPAPRINDVIGTPNFFFLQESEL
DSDVTSQTPIVPHIPPTVNAPIPTQTFTNQNFANAPVGVPQQVIYQHQPPQDISHIPGFA
NPNPPPPIPMPPSHQQPNMQYSPQHPTGFQPQQPQQQQNAAQLPQQGQMQNFNEQTHAQE
APTSTEEKVENGQNEISESSLEQQNESIDWCQMTETNDWNQTDQQQQSVQDCQQASQQTS
QQSWASDQRGGYRGRGGRRGTSNSYNSRGRGNYQQNGRAGQGSYYRNENNYQNGYQQRTW
GNNEGNNGYNTGFKRGSGGGSRGTRNDRVGRGQFRGQRGSNRGGYVSRGKPHTQ
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgccttctgccaaccccaaactagaaaaacaggcctctacggagaccgtggaaccctta
cgccaagcgatcattgtaatcgagcacaagatacggaatcttgagaagcgtaaggggaag
ctcgagtcgtatagggacctgcagaaaaatggaagggaattgaatgcagaccaaaagact
gctgtggcaaaatacgatgaggtgcttcaaacgttggacattactcgggacttgtataag
caaatcgtcaacattgccaatgatgcggttaaacaacagaaaaaactggcaaggaaagag
gctgttgagcgtatgcaacaggacattgcaaaggtgaaggaagtactacttactcaacat
gtcttgataagcataaacacagattccgtgagagacgacttctttcacggaaagaacggc
gctataaaactgtcggaagaggaattcaagtacctcgacagtttatataatgagataatc
ataaaacatcagcgtgaggaaggcgatctgacatttgctcagcaagcgcaaaaagtggcc
gagcattatgttgcgatcgtggacggaaagcaacgtgaagttattggcactacgtacaat
aaattgaaggagatcatcgccaaaatcaatcaatgtggctactttgatcaagttcacgaa
tgttcggaggcaacacccatggaagagattattgagactgtgacggagaccaacattacc
aatgcaacgcaggaacaggtcaatgaggagtatagcaatggcaatgacaggcacattcca
ccagaatccataatacctattccaaattttccagtccaagttaccacgcttcccgttgtt
tctggtgccgctccagtctcgggacccataccagttgttccgcagcccatgccacctcat
ccagccgcgccggttgatactcctttttatacgaatgccactaactttgttccgcaaccg
caacagcaacagcagcagcaacagcaagctcagcaatctcaacagcagcctccgccggcg
ccccgtatcaatgacgttataggcacgcccaacttctttttcttgcaggaatctgaactt
gattcggatgtcacatcgcaaacacccatcgtaccacacattcctcccacagttaatgcg
cccattcccacgcaaaccttcacaaatcagaacttcgcaaatgcgcctgtgggtgtacct
caacaggtcatatatcaacatcaaccaccgcaggatatatcgcacattcctggttttgcg
aatcctaatccaccacctccgattccgatgccaccttctcatcagcagccgaatatgcaa
tatagcccgcaacatccgacaggttttcagcctcaacagccacaacagcaacaaaatgct
gcgcaactaccgcagcaaggtcaaatgcagaattttaatgagcaaacacatgcacaagaa
gctccaacatccacagaggaaaaggtcgaaaatggtcaaaatgaaatttctgaatcatca
ttggaacagcaaaatgaatctattgattggtgtcagatgaccgagaccaatgactggaat
cagactgatcaacagcagcaatctgttcaagattgtcagcaagcatcgcaacaaacatct
caacagtcttgggcgtctgaccaacgtggtggatacagaggaagaggaggcagaagagga
acctctaatagttataatagcaggggcaggggaaattatcagcaaaatggacgcgcagga
caaggctcatattatcgcaatgagaataactaccaaaacggatatcagcagcgtacctgg
ggtaacaacgaaggaaataacggatataataccggtttcaaacgtggcagtggcggaggc
tcaagaggtacacgtaacgaccgcgttggtcgcggacaattcagaggacaaagggggagc
aaccgtggtggatacgtgtcacgcggaaagcctcacacgcaataa
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