Solenopsis invicta (red fire ant): 105205609
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Entry
105205609 CDS
T03916
Name
(RefSeq) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105205609
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soc03019
]
105205609
03009 Ribosome biogenesis [BR:
soc03009
]
105205609
03036 Chromosome and associated proteins [BR:
soc03036
]
105205609
Enzymes [BR:
soc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
105205609
Messenger RNA biogenesis [BR:
soc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
105205609
Ribosome biogenesis [BR:
soc03009
]
Eukaryotic type
90S particles
RNase
105205609
Prokaryotic type
rRNA processing factors
105205609
Chromosome and associated proteins [BR:
soc03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
105205609
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helical_CED_Drosha
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_MRPL44
Motif
Other DBs
NCBI-GeneID:
105205609
NCBI-ProteinID:
XP_039307474
LinkDB
All DBs
Position
7:4869475..4876012
Genome browser
AA seq
1350 aa
AA seq
DB search
MSDLSSVKTEQAYWDTEVENTEYYPIPQVSNFPGYTQPPNYNSPHPYNIPPPNMSGMPPF
NMSNVPPPNVSHIPPPNVSNIPPPNVSNIPPPNVPNISGVSSTNSMYHFAPTTYHNRANF
PNNIPYQNQMHPQCSNQYYDRMDSAPKQYGENYANWNVKSDVYDDNTGNEWQSNNSSANW
TTYQNTSTSWYDTNPTTYNRESLYQTQICETSQRTEEVKWKYDNGQTLSKREISRQRSKS
PHVRQEKVYRSSSESHRDRYRHSREMSSSRDSSYDSRHFERSSVKRHSSYTSRSEESYVS
NRSRKRSKSPEPRTSRDTTPTNNSKRTKGPTEREILLEKYRRNYCATSKDIRRKLSELSA
MGSKGILESEKKIWTRTSPADLYYVRDENNPKIMKSTAKLQELCLTFDTVLINRAAAARA
LQPPYEPPPRKTRARLCRHKSEACSSSSSDSENSMDEDDRTMEELMAKKQHPQRLHPEMW
FNDPGEMNDGPLCRCSAKSRRSGIRHGIYAGEGAINKCDLNTNNADKLFHYRITISPPTN
FLTKTPTIIKHDEHEFIFEGFSMLSHFPLVKLPTCKVIRFNIEYTILYIEEKLPENFTIQ
ELDLFQMFLFKEILELVDFDLHAAQDKSGCGQFHFMPRFVRDLTDNGQEILSMNEVLNYL
IKSSTLLINPDDLHRLVAMPQYKWQDFADEVKGMVVTYPGKKPCSVRVDQLDRNQEDQLS
NKTSPAYPEIVHFGIRPPQLSYAGNADYQKAWRDYVKFRHLLANMSKPSFEDKRKLEAKE
NKLQELRTQSKMKRDVTVDVSSDGFYRTGIMCDIVQHAMLIPVLVCHLRFHKSLDNLERT
LGYEFKNRYLLQLALTHPSYRENFGTNPDHARNSLTNCGIRQPEYGDRRIHYMNTRKRGI
NTLINIMSRFGAKTETESSIAHNERLEFLGDAVVEFLTSIHLFHMFPELEEGGLATYRAA
IVQNQHLAVLAKKLNLEEYMLYAHGSDLCHDLELRHAMANCFEALMGSLFLDGGIEVADR
VFGETLFKGEEDLAKVWVNYPRHPLQEQEPTGDRQWIPSFELLQKLTKFEESIGIEFTHI
RLLARAFTDRSIGYTNLTLGSNQRLEFLGDTVLQLIVSEYLYKFFPEHHEGHLSLLRSSL
VNNKTQAVVCDDLGMTQYALYGNPKAELKTKDRADLLEAFLGALYVDKGLKYCHIFCDVC
FFPRLQDFIMNQDWNDPKSKLQQCCLTLRTMDGGEPDIPVYKVIECKGPTNTRVYTVAVY
FQGKRLATASGHSIQEAEMNSAKEALEKSQDLFPQLDHQKRVIAKSMKMQQWPKVKGKSE
KKSYDKSDDSDCSQSRRRSRSRECNKKESE
NT seq
4053 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatctttcatcggtaaagacagaacaggcatactgggatactgaagtggagaat
acagaatattatccaattcctcaggtgtcaaattttcctggctacactcaacctcccaat
tacaactcgccacatccctacaacatacctcctcccaatatgtcaggtatgcctcctttt
aatatgtcaaatgttcctcctcccaatgtatcgcatattcctcctccaaatgtatcaaat
attcctcctccaaatgtatcaaatattcctcctccgaatgtaccaaacatatctggtgtc
agctcgacaaattcaatgtaccattttgcacctactacctaccataacagagccaatttt
cccaacaatatcccttaccagaatcaaatgcatccacagtgcagcaatcagtattatgac
agaatggattctgcacctaaacagtatggtgaaaattatgcaaattggaatgtaaaatct
gatgtgtatgatgacaatactggtaacgaatggcaatctaacaactcttctgcaaattgg
acaacatatcaaaatacatctacttcatggtatgatacaaacccaacaacatataacaga
gagagcttgtatcaaacacaaatatgtgaaacatcgcaaagaacagaagaagttaaatgg
aaatatgataatgggcaaacattatccaaacgtgaaattagcaggcagaggtctaaaagc
ccacatgttaggcaagagaaagtatatagatcatcatccgaaagccacagagacagatat
cgtcacagtagggaaatgtctagttcgagagactcttcatatgatagcagacactttgaa
cgatcttcagttaaaagacacagcagttatacatctcgctcagaagaatcatatgtaagc
aacagaagcagaaaaaggtccaaatcaccagagcctcgtacaagtagagacacaacaccg
actaacaacagtaaacgaacaaaaggtcctactgagagagagattttgttagagaaatac
agacgtaactattgtgcaacgagtaaggatataaggcgaaaattgagtgaattatcagca
atggggtctaaaggtatacttgaaagtgaaaaaaagatttggacacgcacatcgccagca
gatctctactatgtcagggatgaaaataatccaaaaataatgaaaagtactgctaaacta
caagaattgtgtttaacatttgacacagtgctaataaacagagcagctgcagcaagggca
ttacagccaccatatgaaccacctccaaggaaaacaagagcacgtctttgtcgtcataaa
tctgaagcttgcagcagttcttcgtcagatagtgaaaattctatggatgaagatgataga
acaatggaagagttaatggcaaagaaacagcatccacaaagattgcatcctgaaatgtgg
tttaatgatcctggagaaatgaatgacggtccattatgtcgatgtagtgcaaaatcaaga
cggtcaggtataagacacgggatttatgctggagaaggtgcaataaacaagtgtgacttg
aacacgaataatgcagataaattgtttcactatagaataacaatcagtccaccgacaaat
tttctcaccaaaacaccgacgattatcaaacacgacgaacatgaatttatatttgaaggc
ttctccatgctttctcactttccactagtcaagttacccacgtgtaaagttataagattt
aatattgagtatacgattttgtatatagaagaaaaattgccggaaaattttacaatacag
gagctagatctctttcaaatgtttttattcaaagaaattttagagcttgtagattttgat
ctacacgcggcacaggacaaatccggttgcggacagttccattttatgccaagatttgta
cgcgatttgactgacaatggtcaagagatcctgtcgatgaacgaagttttgaattatttg
ataaaaagcagtactctcttaataaatccagacgatctacatagattggtggccatgcca
caatacaaatggcaagattttgctgatgaagtaaagggaatggtcgttacttacccagga
aaaaaaccgtgcagcgttcgcgttgatcagttagatagaaatcaggaagatcagttgtcc
aataagacatcgcctgcttatcccgagatagttcactttggtattcgtccaccacagctt
agctacgcaggaaatgcagattaccaaaaagcatggagagattatgtgaagtttcgtcat
ttacttgcaaatatgtcgaaaccatccttcgaagataagagaaaattagaagcgaaggag
aataagttgcaagagttgcgtactcagagcaaaatgaaacgcgacgtcacggtcgatgtt
agctctgacggattttatagaaccggtattatgtgtgacatcgtgcaacacgcgatgttg
ataccggtactagtctgccacctaagatttcataaatctctggataatttggaacgcaca
ttgggatacgaattcaaaaacagatacttgctccagttggctcttacacatcctagctac
cgcgagaatttcggtacaaatccagatcacgcgcggaactccttgacgaattgcggcata
agacaacccgaatacggtgaccgcagaattcactatatgaacacgcgtaagcgcggtatt
aataccctgataaacataatgtctagattcggtgcgaaaacggaaacggagtcgtcgata
gcgcacaacgaacgactagagtttctcggcgatgcggtcgtcgagttcctcacctctatc
catctctttcatatgtttccggagttggaggaaggtggtttagctacttacagagcggca
atcgtgcaaaatcagcatctcgccgtgttggcgaaaaaactgaatctggaagagtacatg
ttgtatgctcacggtagcgatctttgccacgacttggagttgcggcatgcaatggcgaat
tgtttcgaagcattgatgggttctctgtttcttgatggagggatagaagtggctgatcgg
gtctttggagagacgcttttcaaaggtgaagaagatctagccaaagtttgggtcaattat
ccacgccatcctcttcaggaacaagaaccaacaggagatagacagtggattcccagcttc
gagttgttacagaaattgaccaaattcgaagaatcaattggaatagaattcacgcatatt
cgccttcttgctagagcgttcacggatcgtagtataggatatactaatttaacattagga
tctaatcaacgactagagttcctaggagatactgtgttgcagcttattgtttctgaatac
ttgtataaattctttccagaacatcatgaaggacacttatcgttgctgcggagctccctc
gtaaataataaaacgcaagcggttgtttgtgatgatctcggtatgactcagtatgcactt
tatgggaatccaaaagctgaattgaaaacaaaagacagagcagatttattagaagctttt
cttggtgcgctttatgttgataagggtttaaagtattgtcacatattttgtgatgtatgc
ttcttcccacgtttacaagattttattatgaatcaagactggaatgatccaaaaagcaag
ttacagcagtgttgcttaactttaagaactatggatggtggcgagccagatatccctgta
tacaaggtcattgagtgtaaaggaccgactaataccagagtttatacagttgctgtatat
ttccaaggaaaacgtttggctacggcgtcaggacatagtatccaagaagcggaaatgaac
tctgctaaagaagctttagaaaaatcacaagacttattcccgcaactggatcatcaaaaa
cgtgtaatagcaaaaagcatgaagatgcagcaatggccgaaagtaaaaggaaaatcagaa
aaaaaatcttatgataaatccgacgattctgactgtagccaaagtcggagaagaagtcgt
agtagagaatgtaataaaaaagaaagtgaatag
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integrated database retrieval system
