Solenopsis invicta (red fire ant): 105205815
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Entry
105205815 CDS
T03916
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc03030
DNA replication
soc03410
Base excision repair
soc03420
Nucleotide excision repair
soc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105205815
03410 Base excision repair
105205815
03420 Nucleotide excision repair
105205815
03430 Mismatch repair
105205815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
soc03032
]
105205815
03400 DNA repair and recombination proteins [BR:
soc03400
]
105205815
DNA replication proteins [BR:
soc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
105205815
DNA repair and recombination proteins [BR:
soc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
105205815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
AAA
BRCT
Rad17
AAA_30
AAA_14
RuvB_N
AAA_5
AAA_22
AAA_16
AAA_33
AAA_6
AAA_7
AAA_17
BRCT_2
AAA_assoc_2
NTPase_1
AAA_19
RNA_helicase
nSTAND3
AAA_18
RCF1-5-like_lid
Motif
Other DBs
NCBI-GeneID:
105205815
NCBI-ProteinID:
XP_011173638
LinkDB
All DBs
Position
5:complement(16916926..16923186)
Genome browser
AA seq
1029 aa
AA seq
DB search
MPRDIRSYFTPIATSHKKNSEPGAPKPQKRRVISSDEDEEKPKLSVKRSKVVRKTKKASI
LSDSEDEAFVKDDEKDSKQFKASKKNESEKPRKAIPSNELFGKKPITRVEETTVNRKLQK
LESEFHDDEDFDAVLKQLDRFQDAKVVHSKEKDNSVKNTDTLNKSEAAVKTEVDTNKRKH
DTCLKDSNNKTNTNTLKIEVEKSSKNGHSKIVTSSPSKLQKEKKNSSNDDLDISNKYDKS
SKRLNFDNSRNNSASTSEEDKDTGKSPSRKKAKTVDLFEERIEKKKQRAIMYEKYLQRGG
ARNPGSKEIPTGATNCLAGISFLITGVLDSLERNEAEDLIRKYSGRTVNTVSSKVNYVIV
GDEAGPAKLTKANSLGIKQISEDDLLEMIRTRPEGKAKDIKPIVTKTKSNVIKTFSEPES
VKLPSLNKELLVSPKKIKTSQSSPVKTETSSPVSKQALDTSNTEQIITSIGSEPLVEKYR
PKTMKQIVGQQGDKSCAHNLYIWLRDWHKNRQDPKVKNGTAKQTHGQSFKAALLSGPPGV
GKTTTVQVVCKELGYDLLEFNASDTRNKTLLKEAISGLLSNTTMKDYVTGTKQKITSKHV
LLMDEVDGMAGNEDRGGLQELVGLIKHTEVPIICICNDRFNTKVKTISTHSYDLKYSKLR
VEQIRSSMKSLCFKENIKISTEDLDRLIESTNHDIRQVINHLEFLSSQTSHVETTDKKNS
NKDFKLGPFDVTKKAFNAEEQKNMNLNDKIGLYFNDYNIAPLFIQENYLGVRLFQMSPRQ
RLERIANAADSISQGDLIEKLMRSNMMWSLLPIHACFSFVIPASEMSGSSEPLIRFPSWF
GRNSKATRFNRLMQELTTHTRLATGASKDALNMDYLPHIRNAIIKPLIDNGTDGIEAAIN
IMGKYHLTREDLDSAIEISLWPGIHDPTSNLDSKVKAAFTRAYQKNPPPLPYAINSTATA
KKKSTQNNDFMEEEEEEDNEDETDDIDSDKMIKAKKSSTSKATASTSKTASKKGGEPVKK
RGRGRGKTK
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgggatatcagatcttactttacgccgatcgcgacttctcacaagaagaacagc
gagcccggtgctccaaagccccagaagcgacgcgtcatttcatcggacgaagatgaggag
aagcccaagttatctgtaaaacgctccaaggttgtacgaaagacaaagaaagcttctatt
ctgtctgactccgaggacgaagcatttgtgaaagatgatgagaaagattctaaacaattt
aaagcaagtaagaaaaatgagagtgaaaaaccacgaaaggcaataccttccaatgaatta
tttgggaagaaaccaataacaagagtagaagagacaacagtaaaccgaaaattacagaaa
ctggaatccgagtttcatgatgatgaagattttgatgctgtgcttaaacaattggataga
tttcaagatgccaaggtggtacacagtaaggaaaaggataatagtgtcaaaaatacagat
actcttaacaagtctgaggctgcagttaagacagaggtggatactaataaaagaaaacat
gatacttgtttgaaagattctaataataaaactaatacgaatacattaaaaattgaggtg
gaaaaatctagtaaaaatggacattcaaaaattgtcacaagttctccttcaaaattacaa
aaagagaagaaaaatagctctaatgatgacttggatataagcaacaaatacgataagagt
tctaaacgattaaattttgacaattcaagaaataattcagcatctacttcagaagaagac
aaagatacaggaaaatcaccaagtagaaagaaagccaaaacagtagatttgttcgaagaa
agaatagaaaagaagaaacagcgtgctataatgtacgaaaaatatcttcaacgaggcggc
gccagaaatcctggttcaaaagagattcctacaggtgccacaaattgtttagccggaata
agtttcttaattaccggtgtcttagattccttagaaaggaacgaagctgaggacttaata
cggaaatacagtggccggactgtaaatactgtatcaagcaaagtaaattatgttatagta
ggagatgaggctggcccagctaaattaacaaaagccaatagtttaggcatcaaacaaata
tccgaagatgatctcctagaaatgattcgcacaagaccagaaggtaaagctaaagatatt
aagccaattgtgacgaaaacgaaatccaacgtgataaaaacatttagtgaacctgagagc
gttaaattaccatcactgaacaaagaattgttagtttcacctaagaagataaaaacgtca
caatcttcaccggtgaaaacagaaacgtcgtcaccagtatcaaaacaggctttagataca
agtaatacagaacagataattacaagcattggatcagaaccgttagttgaaaagtacaga
cccaaaactatgaaacagattgtaggtcagcaaggagataaaagctgtgcacacaatttg
tacatatggttacgtgattggcataaaaatcgtcaggatcccaaagtcaaaaatggcact
gccaagcaaactcacggacaaagtttcaaggctgccttactgtccggtccaccgggcgtt
ggcaaaacaacaactgtgcaagttgtttgtaaagaattgggatacgaccttctagaattc
aatgcttctgacacgagaaacaagacgcttctgaaagaagcaatctcaggattattatct
aatactacgatgaaagattatgtcacaggtactaaacaaaaaattacgagcaagcatgtg
ctattaatggatgaggtcgatggtatggctggcaatgaagatcgcggtggcttacaggaa
ttagttggtttaataaaacacacggaagtgccaattatctgtatatgtaatgatcgattt
aacacaaaagtgaaaacgatttctacgcacagctacgacctgaagtattcgaaactcaga
gtggaacagatcaggagttctatgaaatcattgtgttttaaagagaacattaagatctcg
acagaggatctcgatcgtttaattgagtcgacgaatcacgacattcgtcaagtaataaat
catctggagtttcttagcagtcaaacgtcgcatgtggagacgactgataaaaagaattca
aataaggactttaaactcggtccatttgatgtcacaaaaaaggcattcaatgcagaggaa
caaaaaaatatgaatctgaatgataagattggtttatatttcaatgattataatatagcg
cctctttttatacaagaaaattatctgggagtcagattatttcaaatgtcacctcgtcag
agattagaaagaattgctaatgcagctgacagtatatcccagggagatctcatcgagaag
ttaatgagaagcaatatgatgtggagtctactcccgatacatgcttgtttttcgttcgtt
ataccagctagcgaaatgtcgggaagctctgaaccattgatacgattcccgagctggttt
ggtcgaaattcgaaggcaacgagatttaaccgattaatgcaagagctaacgacacataca
cgactagctacaggtgcaagcaaggatgccttgaatatggattatttgccccatattcga
aatgccattataaaacctctgatagataatgggacggatggtatagaagcagcgataaat
attatgggaaaatatcatttaaccagggaagatttggattcagcaatagaaatttctctt
tggccaggaattcatgatcctacgagtaatcttgatagtaaggtgaaagcagcgtttacg
cgtgcttatcaaaagaatcctcctccattgccatatgcaattaacagcactgctacagca
aagaaaaaatctacacagaacaacgattttatggaagaagaagaagaagaagataatgag
gatgaaactgatgatattgattccgataagatgatcaaggcaaagaaatctagtactagc
aaagcaactgctagcactagtaaaactgcatcgaaaaaaggtggcgaacctgtcaagaaa
cgcggaagaggacgcggtaaaacaaaatag
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