Solenopsis invicta (red fire ant): 105205833
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Entry
105205833 CDS
T03916
Name
(RefSeq) DDB1- and CUL4-associated factor 13
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
soc
Solenopsis invicta (red fire ant)
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
soc03009
]
105205833
04121 Ubiquitin system [BR:
soc04121
]
105205833
Ribosome biogenesis [BR:
soc03009
]
Eukaryotic type
90S particles
Other 90S particles
105205833
Ubiquitin system [BR:
soc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
105205833
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Sof1
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
eIF2A
Beta-prop_WDR19_1st
Beta-prop_NUP159_NUP214
WD40_RFWD3
MIOS_WD40
VPS11_N
Beta-prop_SPT8
KNTC1_N
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
105205833
NCBI-ProteinID:
XP_011173665
LinkDB
All DBs
Position
5:16141092..16143601
Genome browser
AA seq
445 aa
AA seq
DB search
MKVKVLSRNPDEYLRETKRDIHKIPRNFDPALHPFQAVREYTKALNAVKLEKVFAKPFVR
SLEGHKDAVSCMCKHPSQLSTLLSGAYDGEVRTWNLGQGTCTRSFLAHDGIVRGIAYMPD
GKRFITVGDDKTIKTWDTVSAGEEEEEPVNTIVSKMVLTGVTHHWTKPVFVTCGEGICHM
WEDTRNEPLRTFKWGVDSLIDVKFNPVQKDLLASCASDRSIILYDTRETGPLTKIVMKLR
TNKLCWNPMEAFIFTCANEDYNLYTYDARKLKAPVTVHMDHVEAVIDVDYSPTGKEFVSG
SYDKSIRIFETDKFHSREVYHTRRMHRLTCVGWSLDNRFVISGSDEMNLRVWKAKASEKL
GIMKARERNARLVNDTLKEKYAAHPEIRRIARHRQVPKHIYNARAELRTIREKSRRKEAN
RRRHSKKGAVQYVAERKKNVVGQET
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttaaagtgttaagtaggaatcctgatgaatacttacgggagactaaacgagac
attcacaaaatcccacgaaatttcgatcctgcgttgcatcccttccaagcagtcagagaa
tacacaaaagctctgaatgctgttaagttggagaaggtgtttgcgaaaccatttgtacgc
agcttggagggtcacaaagatgcagtgtcctgcatgtgcaaacatccctctcaattgtct
actcttctgagtggcgcttacgacggtgaggtgagaacatggaatctcggccaagggaca
tgcacccgctcgtttctggctcacgatggcatagttcgcggtattgcgtatatgccagat
gggaaacgcttcattactgtcggcgacgacaagacgatcaagacctgggacactgtctct
gctggtgaggaggaggaggaacctgtgaatactattgtcagcaaaatggtattaactggt
gttacacaccattggaccaaaccagtttttgttacctgtggagaaggcatatgccatatg
tgggaagatactaggaatgaacccttacgaacatttaaatggggcgtggatagtttaata
gatgtgaaatttaatccagtacaaaaggatcttttagcatcttgtgccagtgatcgcagc
ataattttatatgacactagagagactggacctttaacaaagatagtaatgaaattacgg
accaacaagctctgttggaatcccatggaagcctttatctttacatgtgctaatgaagat
tacaatttgtacacctatgatgcccgcaagttgaaagcaccagttactgtacacatggat
cacgtggaagctgtgatagatgtggattactcgccaacgggaaaagaatttgtgtcgggc
agctatgacaaatctattcgtatttttgagacggataaattccactcgcgagaggtgtac
cacacaagacgcatgcacagacttacctgcgtaggatggtcgctggataacagatttgta
attagcggcagcgatgaaatgaatcttcgcgtatggaaagctaaagcgtcagaaaagctc
ggcattatgaaagccagagaaagaaacgcgcgactcgtcaatgacactctgaaagagaag
tatgcggcgcatccggaaatccgacgaattgcacgtcatagacaagtgccgaaacatata
tataacgcacgcgccgaattacgaacgattcgcgaaaaaagtagacgcaaggaggctaat
aggcgtcgacattccaagaagggagccgtacagtacgtggcagaaaggaagaagaacgtc
gtgggtcaagagacctga
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