Solenopsis invicta (red fire ant): 105207477
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Entry
105207477 CDS
T03916
Name
(RefSeq) structural maintenance of chromosomes protein 6
KO
K22804
structural maintenance of chromosomes protein 6
Organism
soc
Solenopsis invicta (red fire ant)
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
soc03400
]
105207477
DNA repair and recombination proteins [BR:
soc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
105207477
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_29
AAA_21
CENP-F_leu_zip
RsgA_GTPase
Fez1
ATG16
BRE1
Laminin_II
ABC_tran
EzrA
ATG17_like
Motif
Other DBs
NCBI-GeneID:
105207477
NCBI-ProteinID:
XP_025994363
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All DBs
Position
6:10033527..10040332
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AA seq
1078 aa
AA seq
DB search
MDCMEYDDTQTRRRKASEKTDEHQAKRSKHVEDDIDEQSEEYTAGKVAKIRLYNFMCHDA
LEITLNQNVNFIVGRNGSGKSAILTALTIGLGARANVTSRGTSVKEFIKKGKNNTTVEIT
LVNKGDAAYKPDIYGDTITIVRIIGRNSSSYKIKNWRGEIISSKREELDNIVTTMNIQID
NPISVLNQDVSRTFLVTSKPEEKYNLFMKATLLDAIESNYKEALNICEEEYAKLKQYSMA
LSQIREEIQRLKESIHRLEEVDESRRELNDLEKELVWATAIVEETKLNKIQETLKMYEDN
LKELQNSELSITTKDAEIDAKIKEIKEKIQQAEQEVTDSSEAYKSAKEKHSTANEAYNNK
QREWRSVTHKIKRLEDDINLLKKEIQKLESCNDEEHNKKKEMKERLAKLEEKLDEYDASL
RTKQTELMHLEADKVRLMQEVNYTRNEMENCNRHISKIKRELNAVEQQSDNALSVFGPNI
LRLLKRIEEEYRKNRFQKKPRGPIGAFIKMKDAAWAPAVEYFLGKGFLSSFCVDNSQDAK
LLSSIMKEIFYNNESSLQIISSKFFNQVHDVTRHCTRSPNYSNLLEAMVIEDPVIANCLI
DQREIECVLLIPTNDEACMIMSNASRVPKNCKRAFNLNGDTYFPDPNYRTYGGKCTRAKY
LQVSTTEAMQTLKEELQTAENKKQEVTTAYNAVCEKIKRTNSELNNVNTTVRKLMSAQSE
CTNFINELKDKIGSTEATSADVFRNEAAELEKKLAQENAAEKLLAESTKELQKNVQSLDN
EVKRCRDLRHNLNTVIDPFKDQIRELTQEKERHRHACQRATRKLQEIRQSIQCTSGEFEM
QERATNKAVSNATEKCPRINTTRSKNQIKTLLTELQDKIREVENQFGCVDELRQQLQEKE
QKYGVNIEFAAHLKQSCEKHIERVKKRQKMFLQLREMYSAYVQRSFTDVLSLRQYKGKVK
IDHVNKVLDLHVSARDDKKTGNDTRSLSGGERSYSTVAFILALWDCIQLPFYFLDEFDVF
MDKVNRRVIMDILLDHTRSHPRSQYAFLTPLDTSHILAEDYVTIHQLQPPERRGLSQQ
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atggattgcatggagtatgatgacactcagactcgacggaggaaagcgtccgaaaagacc
gacgagcaccaggccaaacgttccaagcacgtcgaggatgacattgacgaacaaagcgaa
gagtatactgctggaaaagtggcaaagattcgcctttataattttatgtgtcatgatgca
ttggaaataacattgaatcagaatgttaattttatcgtgggacgcaatggcagtggcaaa
agcgctatattgactgcattgactataggacttggtgcgagagcaaatgttacaagcaga
ggaacctctgttaaagagttcatcaagaaaggcaaaaacaacactactgtagagataact
ttagttaataagggagacgctgcttacaagcctgatatttatggtgatacaattacaatt
gtacgaatcattggtcgtaactcgtcatcatataagattaaaaattggagaggagaaatt
atttcttcaaaacgagaggaattggataatattgtaacaacgatgaatatacagattgat
aatccaatatctgttttgaatcaggatgtttcaagaacatttctagttacctctaagcct
gaggaaaagtataatctgtttatgaaagctactctcttggatgccattgaaagtaattat
aaagaagctctcaacatatgtgaagaagagtatgctaaattaaagcaatattccatggct
ttgtcacaaataagagaagaaatacagagattgaaggaaagtatacacagattagaagaa
gtagatgaatcacggcgagaattaaatgatcttgaaaaggaacttgtgtgggctacggcg
attgtggaagaaactaaactaaataagatacaagagactttaaagatgtatgaagataat
ttgaaagagcttcaaaattcagaattatctattacaacaaaggatgcagaaattgatgca
aaaatcaaagaaataaaggaaaaaattcagcaagcagaacaggaagtaacagatagtagc
gaagcttataaaagtgcaaaagaaaaacattcgactgcgaatgaagcatacaataataaa
caacgtgaatggcgttctgtgacacataaaataaaacgattagaagatgatattaatttg
ctgaaaaaggaaattcaaaagttagaaagctgcaacgatgaagaacacaacaagaaaaaa
gaaatgaaggaacgtttagcaaagttagaggaaaaactggatgaatatgatgcctcgtta
cgcaccaagcaaaccgaattgatgcatttagaagctgataaggtgcgacttatgcaagaa
gtaaattacaccagaaatgaaatggagaattgcaacagacatataagtaagatcaaaagg
gagttgaacgcagtcgagcaacagtcggacaacgcattgagtgtatttggaccgaacata
ttgcgtttgttgaagagaatcgaggaggaatatagaaaaaaccgattccagaaaaaacca
cgtggtcctattggtgctttcataaaaatgaaagacgccgcttgggcaccggcagtagaa
tattttctcggtaaaggctttcttagttcgttctgtgtagataatagtcaggatgccaaa
ttgttaagtagtattatgaaagaaattttctataataacgagagtagcctccaaataata
tccagcaaattttttaaccaggtgcatgatgttacacgccactgtacacggtcaccaaat
tattctaatctcttggaagcgatggttatagaagatcctgttatagctaattgcctgatt
gatcaacgcgaaattgaatgtgtacttcttataccgacaaatgatgaagcctgtatgata
atgtcaaacgcgtcaagagtgccaaaaaattgtaagagagcgtttaatctaaatggtgac
acatactttcctgatccaaattatagaacttatggcggaaagtgtacgcgcgctaagtac
cttcaagtttctactacggaagcgatgcaaacactgaaggaagaacttcagacagcggaa
aacaaaaagcaagaagttactacggcttataacgctgtatgtgaaaaaataaaacgcact
aattccgaattaaataatgtaaacacaacagtccgcaaattaatgtccgcacaaagtgaa
tgcacaaattttattaatgaattgaaagataaaattggttcgactgaagccacttctgct
gatgttttccgaaatgaagccgcggaattggaaaagaaattagcgcaggaaaatgccgcg
gaaaagcttttagctgagagtacaaaagaacttcagaagaacgttcagtctctcgacaac
gaagttaagcgttgcagggacttgaggcataatttaaacacagtgattgatccttttaaa
gatcaaataagagagcttacacaggagaaagaacgacatcggcacgcgtgtcaacgtgcc
actcgaaagttacaggaaattcggcaatctatacaatgtacaagtggggaatttgaaatg
caagagagagctacgaataaagctgtctccaacgccactgaaaaatgtcctagaataaat
actaccaggtcgaagaatcaaataaaaactttactaactgaattacaagataagattcgc
gaggtagaaaatcaattcggctgtgtggacgaattacggcagcaactacaagaaaaagag
caaaaatatggggtaaacatcgagttcgcagctcatttgaaacaaagttgtgaaaaacac
atcgagcgagtaaagaaacgacaaaaaatgtttctccaattgagagagatgtacagtgct
tacgtgcagagatctttcaccgacgtgctttctttaagacagtacaagggcaaagtaaaa
atcgatcatgtaaacaaagtgcttgacttacacgtgagtgcacgggacgataaaaagacg
ggcaacgataccagatcgctctcgggaggcgaacgatcttactcgaccgtcgcgtttatc
ttagctctctgggattgcattcaactaccattctactttcttgatgaattcgatgtattt
atggacaaagtaaaccgacgggtgataatggatatccttttagatcacactagatcgcat
ccgcgaagtcaatacgcttttcttacacctctagacacgtcgcacattcttgctgaggat
tacgtaacgattcatcaattacaaccaccagagagaagaggcctcagtcagcagtga
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