KEGG   Solenopsis invicta (red fire ant): 105207618
Entry
105207618         CDS       T03916                                 
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein
  KO
K12857  Prp8 binding protein
Organism
soc  Solenopsis invicta (red fire ant)
Pathway
soc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:soc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105207618
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:soc03041]
    105207618
Spliceosome [BR:soc03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    105207618
 Complex C
   U5 SnRNP specific factors
    105207618
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 WDR55 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_IFT122_1st Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_TEP1_C ANAPC4_WD40 eIF2A Beta-prop_SPT8 NBCH_WD40 Beta-prop_DCAF4 WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_RIG_1st Beta-prop_WDR35_TULP_N Ge1_WD40 WD_LRWD1
Other DBs
NCBI-GeneID: 105207618
NCBI-ProteinID: XP_011175481
LinkDB
Position
15:4109996..4112652
AA seq 349 aa
MPILDKRKGDDILALVPASKRTKNEVVFSSREKAVVQSGPPRTSSLMSMTMLLEGHQGDI
FAIEFHPEGQYLASTGFDRQIFIWNVYGECENIGIMTGHSGAVMELHFSPDGNHLYTAST
DMTLGLWDIVAGTRIKKLKGHTSFVNSVSGARRGPTLLCSGSDDSTIRIWDPRKRGQCYT
LNNTYQVTAVTFNDTAEQVISGGIDNDIKVWDLRKNAVLYKLKGHTDTITGLSLSPDGSY
ILSNAMDNMLKIWDVRPFAPYERCVKILSGHQHNFEKNLLRCAWSPDGSKVSAGSSDRFH
YIWDTTSRRILYKLPGHNGSVNDIDFHPKEPIVCSGSSDKQIYLGEIET
NT seq 1050 nt   +upstreamnt  +downstreamnt
atgccgatcttggacaaaagaaaaggagatgatattctggcgttggtgcctgcttcgaaa
aggaccaaaaatgaagtcgtcttcagcagcagagagaaagcggtcgtccaaagcggtcca
ccacgaacgtcatctctaatgtcaatgacaatgctgctcgaaggacaccaaggggacatt
ttcgccatagaatttcatccagagggacagtatcttgcatctacagggttcgatcgacaa
atctttatctggaatgtttatggagaatgtgaaaatattggcatcatgactgggcacagt
ggtgccgtgatggaattacatttcagtccagatggcaatcacctgtatacagctagcaca
gacatgacattaggtttatgggatatagtagctggcacgcgaattaagaaactgaaaggc
catacctcgtttgtaaattctgtatcgggtgcacgtaggggacccacattgctctgctct
ggcagtgatgatagtacaatacgtatctgggatcccaggaagcggggtcaatgctataca
ttgaacaacacgtaccaggtcactgcagtgacgttcaatgatacggcggaacaagtgatt
agcggtggtattgataacgacataaaggtatgggatcttcgaaagaacgctgtgctgtac
aaattaaaaggacacactgacaccatcaccggattgagtctcagtcctgatgggtcttac
atactttctaacgctatggataacatgctgaagatatgggacgtaagaccgtttgcgccc
tacgagcgctgtgtgaagatactgtcaggacatcaacacaatttcgaaaagaatcttctg
agatgcgcatggtcaccagatggtagtaaagtatcggcgggatcgtcagaccgatttcat
tatatctgggatactacgagtcgtagaatattatacaaattgccaggacacaacggatct
gtgaatgacatcgattttcatccaaaggaacctatagtatgctcgggatctagtgacaaa
caaatctacttaggtgaaatcgagacttaa

DBGET integrated database retrieval system