Solenopsis invicta (red fire ant): 105207647
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Entry
105207647 CDS
T03916
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105207647
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soc03019
]
105207647
03041 Spliceosome [BR:
soc03041
]
105207647
Messenger RNA biogenesis [BR:
soc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
105207647
Spliceosome [BR:
soc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
105207647
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
ATAD4
RWD
Motif
Other DBs
NCBI-GeneID:
105207647
NCBI-ProteinID:
XP_011175514
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All DBs
Position
14:complement(16842728..16846803)
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AA seq
668 aa
AA seq
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MGKENESDSVKKRRKSVSANSGTSIKEGDMYKTIISYEEKEAIERSSENDSECFLATCND
IRAAMTKIAKLKSSGDANKDEIRELQIQTSLAFVELKKLNRMEKFRTKSARDSLVAAKSS
VDSKHLHLQNLLYEVMHLKKEVIKCLQFKSKDELIELVSEEEFLKEAPESISRPEITKNN
PHQLRLARLEWELTQRKQLAALCDELTESKKAVASSIETKQTRLDNLAPQLRSILEASKP
LQESLGLPLDKIRQEHQKASLLASPLYVLYAKASAYRDAYDSTLLVKVEGDEDEAKRANN
HDGLQESDSDPENQSENIIEETPVHKKRHHRLSREARQEEKRSKLLQRHPLHVKIVITLK
KETRLTLHFYYTIHLKVITVESKLETEDLGGISAGDMLVSESVLRELYPRDLGLESPNPA
NQYQLSRHNLGPFSSLGLGIPYKWAQRMAGLHFVSSDANEPQQKLTSQELAQDCVESVLK
EIKRRIKARLDLCMEIRQLESGNLPIFISTTDPVPQKISTSLHRFTTMTWKSYSNYVASP
EFYQRGLILSVDIFYEAVLRRGSSELVARIAIKPDYPKIAPVFNISVSPSVPASADIIRD
IEREVNVMWTKSPTLTAQIQRLRACFDIYLETESMVPKEKIFFHPVRGRTRARPYKYLPL
GGGIFTHR
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggagaacgaatcggacagtgtgaaaaaaaggagaaagtccgtaagcgcgaac
agcggaacgtcgataaaggaaggagatatgtacaagacgataatcagttatgaagaaaag
gaagctattgagagatcatccgagaatgattctgaatgctttttggcaacctgcaatgat
attcgagcggcaatgactaaaatagctaaattgaagtccagtggtgatgcaaataaagat
gaaattcgtgaactgcaaattcaaacgtccctggctttcgtagaactaaagaagctaaat
cgcatggaaaaatttcgtacaaagtctgcacgcgactccttggttgctgcaaaaagtagc
gtagacagcaaacatctgcatttacagaatctattgtacgaagtgatgcatttgaagaaa
gaagttattaaatgccttcagttcaaatctaaagatgaattgatagaacttgtttcagaa
gaggaatttcttaaagaagctccagaaagcatttcacgacctgaaataacaaagaataat
cctcatcaattgagactggctcgtttggaatgggaattgactcaacgaaagcaattggca
gccttgtgtgatgaattgacagagagtaaaaaggcagtagcatctagtattgaaacgaaa
cagactcgtttggataatctcgcgccgcaactgcgttctatattagaagcaagtaaaccg
ttacaagaaagtcttggattgccattagacaaaattcgccaggagcatcaaaaggcttcg
ttgctcgcatcaccgctttatgtattgtacgcgaaggcatctgcttacagggatgcttat
gatagtacattgctggtcaaagtggaaggtgacgaggacgaagcaaaacgcgcgaacaat
catgatggtttacaagagtctgattcggatcctgaaaatcaatctgaaaatatcatagaa
gaaacgcctgtgcataagaaaaggcatcacagattatctcgcgaagccaggcaagaagaa
aagcgatccaaactattgcagcgacatccgttgcatgtaaaaatagttatcacattaaaa
aaggagacaaggctgactcttcacttttattatacaatacatttgaaagtcataacagtc
gagtcgaaactcgaaacggaagacctgggaggtattagtgctggggacatgctagtatcc
gagtcagttcttcgcgaattgtatccgcgagatttaggattggagagtccgaatcccgct
aatcagtatcagttgtcgcgacataacttgggaccattttcgtctctaggattaggcatt
ccctacaaatgggcacaaagaatggctggtttacactttgtttcatctgatgcgaacgaa
ccacaacaaaagcttacgagtcaagaattggcacaagactgtgtggagagtgtgttaaaa
gaaattaaacggcgcataaaagcgagactggatttatgtatggaaatacgacaactagaa
tccggcaatctgccaatctttatcagtacaacagatcctgtgccgcaaaagatctcgaca
tcattgcatcgattcacgactatgacttggaaaagttactcgaactatgtcgcttcaccg
gaattttatcagcggggattgattttgtctgttgacatcttttatgaagctgtacttcgt
cgtggcagtagcgagcttgtggccaggatcgctatcaagccagattacccgaagatagca
ccagtatttaacataagtgtcagtccatcagtgccagcgtctgctgatatcatcagagac
atcgaaagggaagtcaatgtgatgtggaccaagtccccgacgttgacggcgcaaatacaa
cggctgagagcatgtttcgatatatatctagagactgagagtatggtaccgaaggagaaa
atattcttccatcctgtgagaggacgaactcgcgctcgaccgtacaaatatctgccactg
ggaggaggtatattcactcatcgttga
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