Solenopsis invicta (red fire ant): 105207669
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Entry
105207669 CDS
T03916
Name
(RefSeq) pre-mRNA-splicing factor 38B isoform X1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105207669
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
soc03041
]
105207669
Spliceosome [BR:
soc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
105207669
Complex C
U4/U6.U5 tri-SnRNP related factors
105207669
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
105207669
NCBI-ProteinID:
XP_011175541
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Position
14:17014851..17019447
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AA seq
397 aa
AA seq
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MQMQEAEGADGSPWNNSSGCDDERKPAPKEGKKSNVLPLWGNERTMNLNPLILTNIQSSH
YFKVNLYELKTYHEVIDEIYYKVSHLEPWEKGSRKTAGQTGMCGGRFMQVRGVGAGGIVS
TAYCLLYKLFTLRLTRKQLNGLINHPDSPYIRALGFMYIRYTQPPADLFSWYSDYLEDEE
ELDVKAGGGQTMKMGDILKQFLTKLEWFSTLFPRIPVPIQKDLELRLAERFPQQQVNARN
AKPPITLNSHGKYGNKDGRKDNGNLTTRNQQPRHIPDSETQWGEAERMSQWRARNDEDRK
DKNRERDRERERLRERDRGERVRDRDRERDRYSKRSSSRDRNRRQKDHRSRSRDRSYRDR
SRDCHRDRDRHRDRRGSPYDYATELARERERQRREKE
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgcagatgcaggaggccgagggtgcagacggatccccatggaataattccagtggctgc
gatgacgaacgtaagccagccccaaaggagggtaaaaagtcaaatgtgttgccattatgg
ggcaatgaacggactatgaacttgaatcctttgattctcaccaacatacagtcgtcacat
tatttcaaggtgaatctatatgagctcaagacttatcatgaggtgatcgacgagatctat
tataaggtctctcacctagaaccatgggagaaaggcagcagaaagaccgcgggtcaaacc
ggcatgtgtggaggccggttcatgcaggtacgaggcgtgggagctggcggaattgtttcc
acggcgtattgtctgctgtacaaactcttcacgctgaggctaaccaggaaacagctgaat
ggacttattaatcatccagactcgccctacatacgcgctctaggattcatgtatattaga
tacacacagccaccggcagacttgttcagctggtacagcgactacctggaggacgaggag
gaactagacgtaaaggcgggcggcgggcagacgatgaaaatgggcgacattcttaaacag
ttccttaccaaactcgaatggttctccacgttgtttccgcggataccggtacccattcag
aaggacttggagctacgactggccgagcgttttccgcagcagcaagtaaacgcgcgaaac
gctaaaccgccgatcactcttaatagtcacggcaaatacggtaacaaggatggccgtaag
gacaacggtaatttgacgacgcgtaaccagcaaccccgacatatccctgacagcgagact
cagtggggcgaggccgagcgtatgagccagtggcgtgccagaaacgatgaggatcgtaag
gacaagaatagagagcgcgatcgagagcgcgagaggttgcgagagcgtgatagaggagaa
agagttcgcgatcgagatcgcgaaagagacaggtatagcaaaaggtccagtagtcgtgat
agaaacagaagacaaaaggatcatagaagccgtagcagagacaggtcgtatagagatcga
agcagggactgccatcgtgacagagatcgacatcgggatagaagaggctcgccgtacgac
tacgctacagaattggcacgcgaacgtgagaggcaacgaagggaaaaggaatga
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