KEGG   Solenopsis invicta (red fire ant): 105207742
Entry
105207742         CDS       T03916                                 
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
soc  Solenopsis invicta (red fire ant)
Pathway
soc03013  Nucleocytoplasmic transport
soc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:soc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105207742
  09122 Translation
   03013 Nucleocytoplasmic transport
    105207742
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:soc03019]
    105207742
   03041 Spliceosome [BR:soc03041]
    105207742
Messenger RNA biogenesis [BR:soc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     105207742
Spliceosome [BR:soc03041]
 Complex C
  Other components
   EJC/TREX
    105207742
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    105207742
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40 WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_WDHD1_1st EIF3I WDR55 ANAPC4_WD40 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR19_1st Beta-prop_Aladin WD40_Gbeta Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_Vps41 Beta-prop_IFT140_1st WD40_MABP1-WDR62_2nd Tricorn_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_HPS5 eIF2A RMC1_N Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_NOL10_N Beta-prop_WDR35_TULP_N WDR90_beta-prop_4th NBCH_WD40 DSE1_N Beta-prop_TEP1_C PAC11 Beta-prop_ELP1_1st B-prop_COPA_B_2nd Beta-prop_WDR75_1st TRM82_WD PD40 Beta-prop_EIPR1 vWF_A PROPPIN Cytochrom_D1 Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 105207742
NCBI-ProteinID: XP_011175668
LinkDB
Position
14:complement(18132251..18135188)
AA seq 322 aa
MAVATSRVEELVNYFKSHNKIREQQSHSAKVHSVGWSCDGKYLASGSFDKSVCIFSLCPD
RLKQETTFRGHGGSVDQLCWHAFCPELLSTASGDKTVRIWDTRTQKCTANIGTRGENINI
SWSPDGNTIAVGNKEDLVTFIDARVMKIRAEEQFNFEVNEISWNKDSDTFYLTNGQGCVH
ILSYPELELLHVIKAHPGTCICIEFDPTGQYFATGSADALVSLWDADELCCLRTFSRLEW
PVRTISFSYDGQLLAAASEDLVIDIGEVQTGEKIADVPVEAATFTVAWHPKQYLLAYACD
DKDSYDRKRDAGSLKVFGFAND
NT seq 969 nt   +upstreamnt  +downstreamnt
atggcggttgccacttcgcgtgtggaagaactggttaattatttcaaatcgcataacaaa
attcgagaacagcagagccattcggcaaaggtgcatagcgtaggatggagttgtgacggc
aaatatctggcctcaggttctttcgacaaatccgtttgcatattttcgctgtgcccggat
cgtttgaaacaggaaacgacttttagaggacatggcggtagcgtcgaccagttgtgctgg
catgctttctgtccagaattactgtccacggcgagcggagataaaacagttcgcatctgg
gatacaagaacacaaaagtgcacggcgaacattggcactagaggagagaacatcaacata
tcatggtcgccggatggtaacacgatcgccgtagggaataaagaggatctggtcacgttc
atcgacgcccgggtaatgaagatacgcgcggaagagcaattcaacttcgaagtgaatgaa
atttcgtggaacaaggactcggatacattctatctgacgaatggtcagggctgcgtgcac
atactcagctatccggagctagagctattgcacgtgatcaaagcgcatcctggcacatgt
atctgcatcgagttcgacccgaccggtcagtacttcgccactggatccgcggacgcgctg
gtctccttgtgggatgctgacgaattgtgttgtttgaggacgttctcgcgactggagtgg
ccagtcaggaccatctccttctcgtacgacgggcagcttctagcggcggcttccgaggac
ttggtcatagacattggcgaagtacagaccggcgagaagatcgccgacgttccagtagag
gcggcaacgttcaccgtcgcgtggcatccgaaacagtatctgttggcttacgcatgtgac
gataaagactcttacgaccggaaacgtgacgccggtagtttaaaagtattcggtttcgca
aatgactga

DBGET integrated database retrieval system