Solenopsis invicta (red fire ant): 105207746
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Entry
105207746 CDS
T03916
Name
(RefSeq) nuclear RNA export factor 1
KO
K14284
nuclear RNA export factor
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc03008
Ribosome biogenesis in eukaryotes
soc03013
Nucleocytoplasmic transport
soc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105207746
03015 mRNA surveillance pathway
105207746
03008 Ribosome biogenesis in eukaryotes
105207746
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soc03019
]
105207746
03009 Ribosome biogenesis [BR:
soc03009
]
105207746
Messenger RNA biogenesis [BR:
soc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105207746
mRNA cycle factors
Stress granule specific factors
105207746
Ribosome biogenesis [BR:
soc03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
105207746
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NXF_NTF2
LRR_NXF1-5
Tap-RNA_bind
TAP_C
NTF2
LRR_4
LRR_8
LRR_9
Motif
Other DBs
NCBI-GeneID:
105207746
NCBI-ProteinID:
XP_025989827
LinkDB
All DBs
Position
14:18183033..18193451
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AA seq
643 aa
AA seq
DB search
MPKKSNKSWGDRGNIRGNEAYFGHDDRVRRNEGRDAGIHINSIKHHVSFKTFRPNNRDMS
HNLSLMNLDEDISMFSSSNNNTRQVVINQRDRHRGDRAWETQSRRRYSLMSNRNFKGGQV
GFRLQPLHISQSNWYKIIIPYGHKYEKDYVINTLLNYIAPEVFVPLTYKIIGNNASFYVD
DYKTASALLNCDHKIMMSNGYKLQVKVQPGLPICEIDDKLKERLKQAMVKRYVQETNALD
LSKFYLDPELYSDYFCALFHPIILTTVMDIVGEHIPNLEALNLEGNKMQNIERLAVLSKK
FSKLKILYIGDNKIRNINQLDSIKNLKLVELKLTGNPVCNKYKSRQNDYVGDIRSRFPKL
LRLDGIELPRPIVFDVVDDAVKIPPSQRMFVVNAKVQEIASQFLQQYFTIFDNENRQPLL
DAYDEHAYFTMTIPTSFNNKLYEYSKGNRNLFRINDRIKRQKLLKYGRLYVVSFMSQMPR
TKHLLNTFTMDISLATQAMMIITITGYFQELDNKDEPIRYFNRTFIIVPKGEGCCIRNEQ
LHISQPSETQLKQLYQQLSQLSNQQTQLATPALESIEEAKPTVIELSDDIKQQMTITLSQ
QTSMNLEWSLKCLQVAQWNYDNALSTFQEFYKHGQLSLEVFTK
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaaaagtcaaacaaatcatggggtgatcgtggaaatatccgaggaaacgaggct
tacttcggtcatgatgatcgtgtaagaagaaatgaagggagagatgctggaattcatatt
aattccatcaagcatcatgtttcatttaaaacttttagacctaataatagggatatgtca
cacaatttgtcgttgatgaatttggatgaggatatttcgatgttcagtagttccaacaat
aatacaaggcaagtagtaatcaaccagagagatagacataggggtgacagggcttgggaa
acccaatctcgtagaaggtatagtcttatgtcaaatagaaatttcaagggaggccaagtg
ggttttagattgcagcctcttcacataagccaatccaattggtataaaatcataatacca
tatggtcataagtacgaaaaggattatgttataaatactctcttgaattacattgcacct
gaagtatttgttccattaacatacaaaataataggaaacaatgctagtttttatgtggat
gattataagacagcaagtgcattattaaattgcgatcacaagattatgatgagcaatgga
tacaaactgcaagtcaaggtacaaccaggacttccgatctgcgaaatagatgataaattg
aaggagcgattaaagcaggcgatggttaagagatatgtacaagaaacgaatgctttggat
ttgtctaagttttatcttgatcctgaactttattctgattacttttgtgcgttgttccac
cctattattttgacgactgtgatggatattgtgggagaacacataccgaatttagaagcc
ctcaacctggaaggtaataagatgcaaaacatcgagaggctcgctgtgctaagtaagaaa
ttctccaaattgaagattctttatatcggcgataataagattagaaacattaatcagcta
gattccattaagaatctaaaattggttgaattgaagttaacaggaaatcctgtctgtaac
aaatataaatctcggcaaaatgactatgttggcgatattcggagtagatttccgaagctg
ctgcgtttggacggtatagaattgccacgaccgattgtcttcgatgtagttgacgacgct
gtcaaaattcctccgtcacagagaatgtttgtcgttaatgcaaaagtacaagaaatcgca
agtcagttcttacaacagtatttcacaatatttgataatgagaatcgacaacctctactt
gacgcgtatgatgaacatgcatactttactatgacgataccaacttctttcaataataaa
ttatatgagtatagcaagggaaatcggaacttattcagaataaacgacaggatcaaaaga
caaaaattattgaaatacggtagattgtatgtagtttcctttatgtcacaaatgccaaga
acaaaacatttattgaatacttttacaatggacatctctcttgctacacaagcgatgatg
atcatcacaataacgggttacttccaagaactcgataacaaagacgagcctatccgctac
ttcaatcggacatttataattgttccgaaaggtgaaggatgttgtattcgaaatgaacag
ttgcatattagtcagccatctgagacgcaattgaagcaactttaccagcaattgagtcaa
ctgagcaatcagcaaacccagttggcgacaccagcgctagaatccatagaagaggcaaag
cctacggtaatagagcttagcgatgatataaaacagcagatgacgataacattgagtcag
cagacgagtatgaatctggaatggagtttgaagtgtttacaagtcgcgcagtggaattac
gacaacgctctctccacctttcaagaattttacaagcatggacagttatcgttagaagta
tttacaaagtaa
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