Solenopsis invicta (red fire ant): 105207949
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Entry
105207949 CDS
T03916
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc03018
RNA degradation
soc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105207949
09123 Folding, sorting and degradation
03018 RNA degradation
105207949
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soc03019
]
105207949
03041 Spliceosome [BR:
soc03041
]
105207949
Messenger RNA biogenesis [BR:
soc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105207949
mRNA degradation factors
5'-3' decay
Lsm complex
105207949
Spliceosome [BR:
soc03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
105207949
Complex C
U2 snRNP components
105207949
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
105207949
NCBI-ProteinID:
XP_011175939
LinkDB
All DBs
Position
8:complement(8728801..8730114)
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AA seq
96 aa
AA seq
DB search
MLFYSFFKSLIGKDVVVELKNDLSICGTLYSVDQYLNIKLADISVTDSEKYPHMLSVKNC
FIRGSVVRYVQLPVDEVDIHLLTEAARREAMNAQAR
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgttgttctattcctttttcaaatccttaatcggaaaggacgtagtggtcgaattgaaa
aatgacctcagtatttgcgggacattatattctgtcgaccagtatctaaacataaaattg
gctgacattagcgtaacggattcggaaaagtatccacacatgttatcagtaaagaattgc
ttcattcgtggatctgtggtacgatatgtacaacttccagtggatgaagtagacatccac
ctcttaactgaagctgcgcgaagagaagcgatgaatgctcaagcaagatag
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