Solenopsis invicta (red fire ant): 105207953
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Entry
105207953 CDS
T03916
Name
(RefSeq) spectrin beta chain isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
105207953
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
soc04812
]
105207953
Cytoskeleton proteins [BR:
soc04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
105207953
Intermediate filaments
Intermediate filament-binding proteins
105207953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
PH_11
Motif
Other DBs
NCBI-GeneID:
105207953
NCBI-ProteinID:
XP_011175942
LinkDB
All DBs
Position
8:complement(8675764..8719711)
Genome browser
AA seq
2394 aa
AA seq
DB search
MTTDISVVRGGWDPTLQQEIVDEYEYDGGNSSSRLFERSRIKALAGERELVQKKTFQKWV
NSHLVRCSCRIGDLYVDLRDGKMLIRLLEILSGERLPRPTKGKMRIHCLENVEKALQFLR
EQRVHLENMGSHDIVDGNPRLSLGLIWTIILRFQIQDITIEETDNQETKSAKDALLLWCQ
MKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLIQFDKLSKSNAIYNLNNAFNVAEDK
LGLTKLLDAEDIFVDHPDEKSIITYVVTYYHYFSKMKQETVQGKRIGKVVGIAMENDRMI
NEYESLTSDLLRWIEATIEALGDRRFANSLVGVQSQLSQFSNYRTVEKPPKFVEKGNLEV
LLFTLQSKMRANNQKPYTPKEGKMISDINKAWERLEKAEHERELALREELIRQEKLEQLA
ARFNRKASMRETWLSENQRLVSQDNFGFDLAAVEAAAKKHEAIETDIFAYEERVQAVMAV
SHELEMEKYHDIERINARKDNVLRLWNYLLELLRARRMRLELSLQLQQNFQEMLYILDSM
EEIKLRLLTDDYGKHLMGVEDLLQKHSLVEADINVLGERVKAVVQQSQRFLEQGEGYRPC
DPAIIVERVQQLENAYSELVRLAIERRTRLEESRKLWQFYWDMADEENWIKEKEQIVSTG
DIGHDLTTINLLLSKHKALENEIQSHEPQFMSVAAVGDELVRQQHFGSDRIQERLQEILA
MWNHLLDLAAFRRQRLVEAVDYHQLFADADDIDIWMLDTLRLVSSEDVGRDEANVQSLLK
KHKDVTDELKNYATTIDQLHQQASTLGEQDAKSPEVLERLTSIDNRYKELLELAKLRKQR
LLDALSLYKVFSETDGVEQWIGEKNRMLDTMVPAKDIEDVEIMKHRYNGFEKEMNANASR
VAVVNQLARQLLHVEHPNSEQIVARQNELNQKWAELREKAEGKREELNSAHGVQTFHIEC
RETVSWIEDKKRILQQTDNLEMDLTGVMTLQRRLSGMERDLAAIQAKLDALEKEAEVIQK
EHPEEAAVIRERIAQIHLIWEQLTQMLKERDAKLEEAGDLHRFLRDLDHFQTWLTKTQTD
VASEDTPTSLADAEKLLTQHQNIKEEIDNYTDDYQKMMEYGERLTAEAGDGDTQYMFLRE
RLNALKMGWEELHQMWVNRQNLLSNSLNLQVFDRDARQAEVLLSQQEHILAKDETPTNFE
QAEHMIKRHEAFMTTMDANDEKINSVVQFAGRLVDEGHFAADKVKKKAENINDRRRINRE
KANQLMEKLKDQLQLQMFLQDCEELGEWVQEKHITAQDETYRSAKTIHSKWTRHQAFEAE
IASNKDRLQQLQQAADELIQQKPDLTEIIKPKVTELAEQFVDLETTTHDKGERLFDSNRE
VLIHQTCDDIDSWMNELEKQIESTDTGSDLASVNILMQKQQMIETQMAVKAKQVTELDKQ
AEHLQRTVPDDKMEEIKCKKEKVAQRFAQLKAPLVDRQRQLEKKKEAFQFRRDVEDEKLW
IAEKMPQATSNEYGNSLFNVHMLKKKNQSLRTEIENHEPRINLVCNNGQKLINEGHEDSP
EFQKLISELTEKWRELKDAVDDRNKHLLQNEKAQQYFFDATEAESWMSEQELYMMVEDRG
KDEISAQNLMKKHESLEHAVEDYAETIRQLGETARQLINDQHPLADQIAVKQSQVDKLYA
GLKDLAGERRAKLDEALQLFMLNREVDDLEQWIQERELVAGSHELGQDYDHVTLLWERFK
EFARDTEAIGSERVEAVNGIADSLIATGHSDAATIAEWKDGLNEVWQDLLELIETRTQML
VASRELHKFFHDCKDVLGRILEKQNAMSDELGRDAGSVSALQRKHGNFIQDLSTLQNQVT
QIEEESAKLQASYAGDKAREITNREAEVVAAWNNLQSLCEGRRTKLEDTGDLFRFFNMVR
TLMIWMDDVVRQMNTSEKPRDVAGVELLMNNHQSLKAEIDAREDNLMACINLGKDLLARN
HYASAQIKEKLAALTDHRNALLHRWEERWENLQLILEVYQFARDAAVAEAWLIAQEPYLM
SQELGHTIDEVENLIKKHEAFEKSAAAQEERFSALHRLTTFELKELKRREQEREEEERRK
KEEAAAAEAARLAKATPVTSPDEPPSERAETDGTGERGEDEGHAHRKASRTPQPQDKPKE
VHAQRPRQLAFREGDGTQPVTPTSVKTPTHGSRTPTTPKGSEASRRKERSRSKSPFRSFR
WRKSAKSPSLDRSGVSDDEHSIPEPRSPGDDEFEGPLQRKHEWESTTKKASNRSWDKVYM
VVRGQSLCVYKDQKSYKASPDQPYKGEAPLDLRGATITVASDYTKKKHVFRVKSQSGSDF
LFQAKDDTEMNDWVSALNQAAQGTSGAGTSRAHTLPAPTQAETKRRSFFTLKKN
NT seq
7185 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccgacatctcggtagtgcgcgggggttgggaccccacgctacaacaagagatt
gtcgacgagtacgaatacgacgggggaaactcgagttcgagacttttcgaacggtcacgc
atcaaggcactagctggtgagcgtgaattagtgcaaaagaagaccttccagaaatgggtc
aactcccacttagtccgatgttcgtgccgaatcggcgatctgtacgtcgatctacgagac
ggcaagatgctgataaggctgttagagatcttgtcgggtgagcgtctgccgcgccctacc
aagggcaagatgcgcattcattgcctggagaacgttgagaaggcgctgcaattcttgcgc
gagcagagggtacacctggagaacatgggatcccacgacatcgtcgacggaaatccgcgt
ctgagcttgggtctcatttggactataattctgcgattccagattcaggacatcacaatc
gaagagacagataatcaggagaccaagtccgccaaggacgcgttattattatggtgtcaa
atgaagactgcgggttatcacaacgtgaacgtaagaaatttcacgacatcgtggcgggac
ggtttggcgttcaatgcgatcatacacaaacaccgtccagatttgattcagttcgacaag
ctttccaagtcgaacgcgatctacaaccttaacaatgccttcaacgtcgcggaggacaaa
ctcggcctcacgaagctactggatgccgaggatatctttgtcgatcatccggacgaaaag
tccatcataacatacgtcgtcacgtattatcactatttctcaaagatgaaacaggagacc
gtgcaaggtaagagaatcggcaaagtagtcggtatcgcgatggagaatgaccgtatgata
aacgagtacgagagtcttactagcgatctgctgcgctggatcgaggctacgatagaggcg
cttggtgatcgcagatttgccaattccctggtaggcgtccaatcacaactttcgcaattt
tcaaattatcgcacggtagaaaaaccgcccaagttcgtagaaaaaggtaatcttgaagta
ttgttgtttactttacaatcgaagatgcgcgcaaataatcagaaaccctatacgcccaaa
gagggtaaaatgatatccgatatcaataaggcatgggagagactagagaaagctgaacat
gaacgggaattggctctgcgcgaagaactgattcgacaagagaaattggagcagttagca
gctagatttaaccgaaaggctagcatgcgcgagacatggttgtcggaaaatcagcgattg
gtatcgcaggataactttggctttgatctcgctgccgtggaagccgctgcgaagaaacac
gaagctatagagactgacatctttgcctatgaagaacgtgtgcaagccgtcatggcagtc
tcgcacgagctcgagatggagaagtatcatgacatcgagcgcattaacgctcgtaaggac
aatgtattgcgactttggaactatcttctggaattactgcgcgccaggcggatgcgtctg
gaactctctttgcagctgcagcaaaacttccaggagatgttgtatatattggacagtatg
gaggagatcaagttgcgactattgacagacgattacggcaaacatttaatgggcgtggag
gatctgttgcaaaagcactctctcgtcgaagcagatatcaatgtgctcggcgaaagagtc
aaggccgttgttcagcagagccagagattcctagagcagggagaaggctatcgaccatgc
gatccggccatcatcgtcgaacgcgtgcaacaattagagaacgcgtactccgagttggtg
cggttagcgatcgagcgtcgtaccaggctcgaggaatctcggaagctctggcaattttat
tgggatatggccgacgaggagaattggataaaggagaaagaacagatcgtatccacgggc
gacatcggtcacgatttgaccaccattaatctgttattgtccaaacacaaagcattggag
aacgagatacagtcgcatgagccgcaatttatgtccgtcgcagcggtcggcgacgaatta
gttcggcaacaacatttcggctccgaccgtattcaggagagacttcaggagattctcgct
atgtggaatcatctactggatctcgcggctttcagaagacaacggcttgtagaggctgtt
gactatcaccagcttttcgcagatgcggacgacatagacatctggatgttggacacttta
cgacttgtctcgtcggaggatgttggtagagacgaggcaaatgtgcaatcgttgttgaag
aaacacaaggacgtaacggatgagcttaagaattatgccacgactatcgaccagcttcat
cagcaggcgtccacattgggcgagcaggatgccaaatcaccggaagttttggagagactg
acttcgatagataacagatacaaggagctcctcgagcttgccaagttgcgtaaacagaga
ctgctcgatgcgctctcgttgtacaaagtattcagcgagaccgacggagtcgaacaatgg
atcggcgagaagaacagaatgttggatacgatggtgcctgccaaggatatcgaagatgtc
gagatcatgaaacatcgctataacggctttgagaaagagatgaatgcgaacgcatcccgc
gttgctgtggttaatcaactggccagacagttgttgcatgttgaacacccgaactcggaa
cagatagtcgcgcgacaaaacgagctgaaccagaaatgggccgagctgcgcgagaaggcg
gagggcaagcgcgaagaactgaactccgcacatggcgtgcagacattccacatcgaatgt
cgcgaaaccgtgtcttggatcgaggataaaaagcgaatcctgcagcagactgacaatttg
gagatggatttgactggtgtgatgacactgcagcgtagattgagcggcatggagcgcgat
ttagcagccattcaggccaaattagacgctctagagaaagaggcggaagtcatacagaaa
gaacatccagaggaggctgcagtgatacgcgagagaattgcgcagattcatttgatttgg
gaacaattgacgcagatgctgaaagagcgcgatgctaagctcgaggaggccggagatcta
catcggttcttgcgcgacctcgatcacttccaaacgtggctcacgaaaacacagaccgat
gttgccagcgaagacacgccaaccagtcttgccgatgccgagaagctgctcactcagcat
cagaacatcaaggaggagatcgacaattacaccgacgattatcagaagatgatggagtac
ggcgaacggctgacggcggaagccggcgatggcgacacacaatacatgttcttacgcgag
agattgaacgcactaaagatgggctgggaagaattgcatcagatgtgggtaaatcgtcag
aatttactatccaactccctgaatctacaagtattcgatcgagacgcgcgtcaagcggag
gtgcttctatcgcaacaggaacatattcttgccaaggacgaaacgccgacgaacttcgag
caagcagagcacatgatcaagcgacacgaggccttcatgaccaccatggacgccaacgac
gagaaaatcaattcggtcgtgcaatttgccgggcgtttggtcgatgagggacactttgca
gctgataaggttaagaagaaggccgagaacatcaatgatcgtcggcgaattaatcgcgag
aaggccaatcaacttatggagaaactcaaggatcagcttcagctgcagatgttcctgcaa
gattgtgaagaacttggtgaatgggtacaagagaaacatatcactgctcaggatgagaca
tacagaagcgcgaagactattcatagcaagtggactcgtcatcaagcattcgaagcagaa
atcgccagcaataaagaccgcctgcagcaattgcagcaagccgcagacgaattgattcaa
cagaaaccagatttgaccgagattattaaaccgaaggtaaccgaattggcggaacaattt
gtcgatctggaaactactactcacgataagggcgagcgattgttcgattcaaatcgcgag
gtgttgatacaccaaacctgtgatgatatcgattcttggatgaatgagctagagaaacag
atagagagcaccgataccggttccgatctggcatccgtaaatatattgatgcagaaacaa
cagatgatcgagactcaaatggcggtgaaagcgaaacaggttaccgagctagataaacag
gcggaacacttgcaacgcacagtacccgatgacaagatggaggagatcaaatgcaaaaaa
gagaaagttgcccaaagatttgcccagctcaaggcaccgctcgttgatcgtcaacggcag
ctcgagaaaaagaaagaggcttttcaattccgacgcgatgtcgaggatgagaagttatgg
atcgctgagaagatgccgcaggcaactagcaacgagtatggaaactcgctatttaacgtt
catatgctaaaaaagaagaatcaatcattgcgcacggaaattgagaatcacgagcctagg
atcaatttggtgtgtaataacgggcagaaactgattaacgagggacatgaagatagtccc
gaattccagaaattgatatccgaattaacggagaagtggcgcgagttgaaggacgcagtc
gatgatagaaacaagcatctgctgcaaaatgagaaagcgcagcaatacttctttgacgct
actgaggctgagtcatggatgagcgagcaagaactgtatatgatggtcgaggatcgtgga
aaggacgagatttctgctcagaatctgatgaagaaacatgagtcgcttgaacatgcggtt
gaagattacgcggaaacgattcgtcagctaggagagactgctaggcagctaataaacgat
caacatccgttggccgatcaaattgccgtgaaacagtcgcaggtggacaaattgtatgcc
ggtctcaaggatttggcgggcgaacgacgcgccaaactggacgaggcactccagttgttc
atgctgaacagagaagtcgacgacctcgaacaatggatccaggagagagaattggtcgcc
ggtagtcacgagttgggccaagattacgatcacgtgacattgctgtgggagagattcaag
gagttcgcgcgcgacaccgaggcgatcggttccgaacgagtggaggcggtgaatggcatt
gccgattctcttatcgccaccggacattccgacgcagcgacgattgccgagtggaaggac
ggcttaaacgaggtctggcaggatctgttggaattgatcgagacgcgcacgcaaatgctg
gtggccagtcgcgagttgcataaattcttccacgattgcaaggacgttctcggcagaatt
ctggagaaacaaaacgccatgtccgacgaattgggtcgcgacgccggctcggtgtccgcc
ctccaacgtaaacacggcaacttcattcaggacttgtccacgttacagaatcaggtgacg
cagatcgaggaggaatccgccaaattgcaggcgagctacgcgggcgataaggcgcgggag
atcacgaatcgcgaagccgaggttgtagcggcgtggaacaacttgcaatcgttatgcgag
ggcagacgaactaaattggaggacaccggtgatctcttccgattcttcaatatggttaga
actctgatgatctggatggacgatgttgtacgccaaatgaacacgtccgagaaaccgcgt
gacgtcgccggggtcgaattattgatgaacaatcatcagagtttgaaggcggagattgat
gccagagaggataatcttatggcgtgcattaatctcggaaaagacctgttagctagaaat
cattatgcaagcgcgcagataaaggagaaactggcagcattgaccgatcacaggaacgca
ctgttacaccgatgggaggaacgttgggagaacctgcaactcattttggaagtttatcaa
tttgctcgagatgctgcagttgctgaagcatggttaattgctcaagagccatatcttatg
agccaagagcttggtcatactatcgacgaagtcgagaatttaatcaagaaacacgaggct
ttcgaaaaatcggcagctgcacaagaagaaaggtttagtgccttgcaccgacttactact
ttcgaattgaaagaattgaaacgacgagagcaagaaagggaggaagaggaaagacgcaag
aaggaggaagcggcagcagcggaagccgcgcgtttggcaaaggcgacgcctgttactagt
ccagatgaaccacctagcgaaagagccgaaactgacgggactggagaacgcggagaagac
gagggacacgcacatcgcaaggcttcacgtacaccacagcctcaagacaagcccaaggaa
gtgcatgcacaaagacctagacagctggcttttcgggaaggagatggaactcagcctgtc
acgccaacatctgtgaaaactccgacgcatggtagccgcacgccgacaactccgaaaggc
tccgaggcttcaagacgtaaggaaagaagccgcagcaagtcaccattcaggagcttccgc
tggagaaagtccgccaagtcgccgagtttagatcgcagtggcgtgagtgatgatgagcac
agtattcctgaaccgcgaagtccgggtgacgacgagttcgaagggccgttgcagcgaaag
cacgaatgggaaagtacgacgaagaaagcgtccaatcgctcttgggacaaggtgtacatg
gtcgtacgcgggcagagcttatgtgtatataaagatcaaaagtcgtacaaagcctcgccc
gatcaaccgtacaaaggagaggctcctcttgacttacgaggcgcgactattaccgtagcg
agtgattacactaagaagaaacatgtcttccgagtaaagtcgcaaagcggatccgacttc
ctgttccaggccaaagacgataccgaaatgaacgactgggtgtccgcattaaatcaagcg
gcacaaggaacatcaggtgcaggcacatctagggctcacaccttgccagctccgacacaa
gccgaaactaagcgacgtagtttcttcactctcaagaaaaactaa
DBGET
integrated database retrieval system
