Solenopsis invicta (red fire ant): 105207953
Help
Entry
105207953 CDS
T03916
Name
(RefSeq) spectrin beta chain isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc04517
IgSF CAM signaling
soc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
105207953
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
105207953
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
soc04812
]
105207953
Cytoskeleton proteins [BR:
soc04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
105207953
Intermediate filaments
Intermediate filament-binding proteins
105207953
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
PH_11
CCDC162_middle
Motif
Other DBs
NCBI-GeneID:
105207953
NCBI-ProteinID:
XP_011175942
LinkDB
All DBs
Position
8:complement(8675764..8719711)
Genome browser
AA seq
2394 aa
AA seq
DB search
MTTDISVVRGGWDPTLQQEIVDEYEYDGGNSSSRLFERSRIKALAGERELVQKKTFQKWV
NSHLVRCSCRIGDLYVDLRDGKMLIRLLEILSGERLPRPTKGKMRIHCLENVEKALQFLR
EQRVHLENMGSHDIVDGNPRLSLGLIWTIILRFQIQDITIEETDNQETKSAKDALLLWCQ
MKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLIQFDKLSKSNAIYNLNNAFNVAEDK
LGLTKLLDAEDIFVDHPDEKSIITYVVTYYHYFSKMKQETVQGKRIGKVVGIAMENDRMI
NEYESLTSDLLRWIEATIEALGDRRFANSLVGVQSQLSQFSNYRTVEKPPKFVEKGNLEV
LLFTLQSKMRANNQKPYTPKEGKMISDINKAWERLEKAEHERELALREELIRQEKLEQLA
ARFNRKASMRETWLSENQRLVSQDNFGFDLAAVEAAAKKHEAIETDIFAYEERVQAVMAV
SHELEMEKYHDIERINARKDNVLRLWNYLLELLRARRMRLELSLQLQQNFQEMLYILDSM
EEIKLRLLTDDYGKHLMGVEDLLQKHSLVEADINVLGERVKAVVQQSQRFLEQGEGYRPC
DPAIIVERVQQLENAYSELVRLAIERRTRLEESRKLWQFYWDMADEENWIKEKEQIVSTG
DIGHDLTTINLLLSKHKALENEIQSHEPQFMSVAAVGDELVRQQHFGSDRIQERLQEILA
MWNHLLDLAAFRRQRLVEAVDYHQLFADADDIDIWMLDTLRLVSSEDVGRDEANVQSLLK
KHKDVTDELKNYATTIDQLHQQASTLGEQDAKSPEVLERLTSIDNRYKELLELAKLRKQR
LLDALSLYKVFSETDGVEQWIGEKNRMLDTMVPAKDIEDVEIMKHRYNGFEKEMNANASR
VAVVNQLARQLLHVEHPNSEQIVARQNELNQKWAELREKAEGKREELNSAHGVQTFHIEC
RETVSWIEDKKRILQQTDNLEMDLTGVMTLQRRLSGMERDLAAIQAKLDALEKEAEVIQK
EHPEEAAVIRERIAQIHLIWEQLTQMLKERDAKLEEAGDLHRFLRDLDHFQTWLTKTQTD
VASEDTPTSLADAEKLLTQHQNIKEEIDNYTDDYQKMMEYGERLTAEAGDGDTQYMFLRE
RLNALKMGWEELHQMWVNRQNLLSNSLNLQVFDRDARQAEVLLSQQEHILAKDETPTNFE
QAEHMIKRHEAFMTTMDANDEKINSVVQFAGRLVDEGHFAADKVKKKAENINDRRRINRE
KANQLMEKLKDQLQLQMFLQDCEELGEWVQEKHITAQDETYRSAKTIHSKWTRHQAFEAE
IASNKDRLQQLQQAADELIQQKPDLTEIIKPKVTELAEQFVDLETTTHDKGERLFDSNRE
VLIHQTCDDIDSWMNELEKQIESTDTGSDLASVNILMQKQQMIETQMAVKAKQVTELDKQ
AEHLQRTVPDDKMEEIKCKKEKVAQRFAQLKAPLVDRQRQLEKKKEAFQFRRDVEDEKLW
IAEKMPQATSNEYGNSLFNVHMLKKKNQSLRTEIENHEPRINLVCNNGQKLINEGHEDSP
EFQKLISELTEKWRELKDAVDDRNKHLLQNEKAQQYFFDATEAESWMSEQELYMMVEDRG
KDEISAQNLMKKHESLEHAVEDYAETIRQLGETARQLINDQHPLADQIAVKQSQVDKLYA
GLKDLAGERRAKLDEALQLFMLNREVDDLEQWIQERELVAGSHELGQDYDHVTLLWERFK
EFARDTEAIGSERVEAVNGIADSLIATGHSDAATIAEWKDGLNEVWQDLLELIETRTQML
VASRELHKFFHDCKDVLGRILEKQNAMSDELGRDAGSVSALQRKHGNFIQDLSTLQNQVT
QIEEESAKLQASYAGDKAREITNREAEVVAAWNNLQSLCEGRRTKLEDTGDLFRFFNMVR
TLMIWMDDVVRQMNTSEKPRDVAGVELLMNNHQSLKAEIDAREDNLMACINLGKDLLARN
HYASAQIKEKLAALTDHRNALLHRWEERWENLQLILEVYQFARDAAVAEAWLIAQEPYLM
SQELGHTIDEVENLIKKHEAFEKSAAAQEERFSALHRLTTFELKELKRREQEREEEERRK
KEEAAAAEAARLAKATPVTSPDEPPSERAETDGTGERGEDEGHAHRKASRTPQPQDKPKE
VHAQRPRQLAFREGDGTQPVTPTSVKTPTHGSRTPTTPKGSEASRRKERSRSKSPFRSFR
WRKSAKSPSLDRSGVSDDEHSIPEPRSPGDDEFEGPLQRKHEWESTTKKASNRSWDKVYM
VVRGQSLCVYKDQKSYKASPDQPYKGEAPLDLRGATITVASDYTKKKHVFRVKSQSGSDF
LFQAKDDTEMNDWVSALNQAAQGTSGAGTSRAHTLPAPTQAETKRRSFFTLKKN
NT seq
7185 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccgacatctcggtagtgcgcgggggttgggaccccacgctacaacaagagatt
gtcgacgagtacgaatacgacgggggaaactcgagttcgagacttttcgaacggtcacgc
atcaaggcactagctggtgagcgtgaattagtgcaaaagaagaccttccagaaatgggtc
aactcccacttagtccgatgttcgtgccgaatcggcgatctgtacgtcgatctacgagac
ggcaagatgctgataaggctgttagagatcttgtcgggtgagcgtctgccgcgccctacc
aagggcaagatgcgcattcattgcctggagaacgttgagaaggcgctgcaattcttgcgc
gagcagagggtacacctggagaacatgggatcccacgacatcgtcgacggaaatccgcgt
ctgagcttgggtctcatttggactataattctgcgattccagattcaggacatcacaatc
gaagagacagataatcaggagaccaagtccgccaaggacgcgttattattatggtgtcaa
atgaagactgcgggttatcacaacgtgaacgtaagaaatttcacgacatcgtggcgggac
ggtttggcgttcaatgcgatcatacacaaacaccgtccagatttgattcagttcgacaag
ctttccaagtcgaacgcgatctacaaccttaacaatgccttcaacgtcgcggaggacaaa
ctcggcctcacgaagctactggatgccgaggatatctttgtcgatcatccggacgaaaag
tccatcataacatacgtcgtcacgtattatcactatttctcaaagatgaaacaggagacc
gtgcaaggtaagagaatcggcaaagtagtcggtatcgcgatggagaatgaccgtatgata
aacgagtacgagagtcttactagcgatctgctgcgctggatcgaggctacgatagaggcg
cttggtgatcgcagatttgccaattccctggtaggcgtccaatcacaactttcgcaattt
tcaaattatcgcacggtagaaaaaccgcccaagttcgtagaaaaaggtaatcttgaagta
ttgttgtttactttacaatcgaagatgcgcgcaaataatcagaaaccctatacgcccaaa
gagggtaaaatgatatccgatatcaataaggcatgggagagactagagaaagctgaacat
gaacgggaattggctctgcgcgaagaactgattcgacaagagaaattggagcagttagca
gctagatttaaccgaaaggctagcatgcgcgagacatggttgtcggaaaatcagcgattg
gtatcgcaggataactttggctttgatctcgctgccgtggaagccgctgcgaagaaacac
gaagctatagagactgacatctttgcctatgaagaacgtgtgcaagccgtcatggcagtc
tcgcacgagctcgagatggagaagtatcatgacatcgagcgcattaacgctcgtaaggac
aatgtattgcgactttggaactatcttctggaattactgcgcgccaggcggatgcgtctg
gaactctctttgcagctgcagcaaaacttccaggagatgttgtatatattggacagtatg
gaggagatcaagttgcgactattgacagacgattacggcaaacatttaatgggcgtggag
gatctgttgcaaaagcactctctcgtcgaagcagatatcaatgtgctcggcgaaagagtc
aaggccgttgttcagcagagccagagattcctagagcagggagaaggctatcgaccatgc
gatccggccatcatcgtcgaacgcgtgcaacaattagagaacgcgtactccgagttggtg
cggttagcgatcgagcgtcgtaccaggctcgaggaatctcggaagctctggcaattttat
tgggatatggccgacgaggagaattggataaaggagaaagaacagatcgtatccacgggc
gacatcggtcacgatttgaccaccattaatctgttattgtccaaacacaaagcattggag
aacgagatacagtcgcatgagccgcaatttatgtccgtcgcagcggtcggcgacgaatta
gttcggcaacaacatttcggctccgaccgtattcaggagagacttcaggagattctcgct
atgtggaatcatctactggatctcgcggctttcagaagacaacggcttgtagaggctgtt
gactatcaccagcttttcgcagatgcggacgacatagacatctggatgttggacacttta
cgacttgtctcgtcggaggatgttggtagagacgaggcaaatgtgcaatcgttgttgaag
aaacacaaggacgtaacggatgagcttaagaattatgccacgactatcgaccagcttcat
cagcaggcgtccacattgggcgagcaggatgccaaatcaccggaagttttggagagactg
acttcgatagataacagatacaaggagctcctcgagcttgccaagttgcgtaaacagaga
ctgctcgatgcgctctcgttgtacaaagtattcagcgagaccgacggagtcgaacaatgg
atcggcgagaagaacagaatgttggatacgatggtgcctgccaaggatatcgaagatgtc
gagatcatgaaacatcgctataacggctttgagaaagagatgaatgcgaacgcatcccgc
gttgctgtggttaatcaactggccagacagttgttgcatgttgaacacccgaactcggaa
cagatagtcgcgcgacaaaacgagctgaaccagaaatgggccgagctgcgcgagaaggcg
gagggcaagcgcgaagaactgaactccgcacatggcgtgcagacattccacatcgaatgt
cgcgaaaccgtgtcttggatcgaggataaaaagcgaatcctgcagcagactgacaatttg
gagatggatttgactggtgtgatgacactgcagcgtagattgagcggcatggagcgcgat
ttagcagccattcaggccaaattagacgctctagagaaagaggcggaagtcatacagaaa
gaacatccagaggaggctgcagtgatacgcgagagaattgcgcagattcatttgatttgg
gaacaattgacgcagatgctgaaagagcgcgatgctaagctcgaggaggccggagatcta
catcggttcttgcgcgacctcgatcacttccaaacgtggctcacgaaaacacagaccgat
gttgccagcgaagacacgccaaccagtcttgccgatgccgagaagctgctcactcagcat
cagaacatcaaggaggagatcgacaattacaccgacgattatcagaagatgatggagtac
ggcgaacggctgacggcggaagccggcgatggcgacacacaatacatgttcttacgcgag
agattgaacgcactaaagatgggctgggaagaattgcatcagatgtgggtaaatcgtcag
aatttactatccaactccctgaatctacaagtattcgatcgagacgcgcgtcaagcggag
gtgcttctatcgcaacaggaacatattcttgccaaggacgaaacgccgacgaacttcgag
caagcagagcacatgatcaagcgacacgaggccttcatgaccaccatggacgccaacgac
gagaaaatcaattcggtcgtgcaatttgccgggcgtttggtcgatgagggacactttgca
gctgataaggttaagaagaaggccgagaacatcaatgatcgtcggcgaattaatcgcgag
aaggccaatcaacttatggagaaactcaaggatcagcttcagctgcagatgttcctgcaa
gattgtgaagaacttggtgaatgggtacaagagaaacatatcactgctcaggatgagaca
tacagaagcgcgaagactattcatagcaagtggactcgtcatcaagcattcgaagcagaa
atcgccagcaataaagaccgcctgcagcaattgcagcaagccgcagacgaattgattcaa
cagaaaccagatttgaccgagattattaaaccgaaggtaaccgaattggcggaacaattt
gtcgatctggaaactactactcacgataagggcgagcgattgttcgattcaaatcgcgag
gtgttgatacaccaaacctgtgatgatatcgattcttggatgaatgagctagagaaacag
atagagagcaccgataccggttccgatctggcatccgtaaatatattgatgcagaaacaa
cagatgatcgagactcaaatggcggtgaaagcgaaacaggttaccgagctagataaacag
gcggaacacttgcaacgcacagtacccgatgacaagatggaggagatcaaatgcaaaaaa
gagaaagttgcccaaagatttgcccagctcaaggcaccgctcgttgatcgtcaacggcag
ctcgagaaaaagaaagaggcttttcaattccgacgcgatgtcgaggatgagaagttatgg
atcgctgagaagatgccgcaggcaactagcaacgagtatggaaactcgctatttaacgtt
catatgctaaaaaagaagaatcaatcattgcgcacggaaattgagaatcacgagcctagg
atcaatttggtgtgtaataacgggcagaaactgattaacgagggacatgaagatagtccc
gaattccagaaattgatatccgaattaacggagaagtggcgcgagttgaaggacgcagtc
gatgatagaaacaagcatctgctgcaaaatgagaaagcgcagcaatacttctttgacgct
actgaggctgagtcatggatgagcgagcaagaactgtatatgatggtcgaggatcgtgga
aaggacgagatttctgctcagaatctgatgaagaaacatgagtcgcttgaacatgcggtt
gaagattacgcggaaacgattcgtcagctaggagagactgctaggcagctaataaacgat
caacatccgttggccgatcaaattgccgtgaaacagtcgcaggtggacaaattgtatgcc
ggtctcaaggatttggcgggcgaacgacgcgccaaactggacgaggcactccagttgttc
atgctgaacagagaagtcgacgacctcgaacaatggatccaggagagagaattggtcgcc
ggtagtcacgagttgggccaagattacgatcacgtgacattgctgtgggagagattcaag
gagttcgcgcgcgacaccgaggcgatcggttccgaacgagtggaggcggtgaatggcatt
gccgattctcttatcgccaccggacattccgacgcagcgacgattgccgagtggaaggac
ggcttaaacgaggtctggcaggatctgttggaattgatcgagacgcgcacgcaaatgctg
gtggccagtcgcgagttgcataaattcttccacgattgcaaggacgttctcggcagaatt
ctggagaaacaaaacgccatgtccgacgaattgggtcgcgacgccggctcggtgtccgcc
ctccaacgtaaacacggcaacttcattcaggacttgtccacgttacagaatcaggtgacg
cagatcgaggaggaatccgccaaattgcaggcgagctacgcgggcgataaggcgcgggag
atcacgaatcgcgaagccgaggttgtagcggcgtggaacaacttgcaatcgttatgcgag
ggcagacgaactaaattggaggacaccggtgatctcttccgattcttcaatatggttaga
actctgatgatctggatggacgatgttgtacgccaaatgaacacgtccgagaaaccgcgt
gacgtcgccggggtcgaattattgatgaacaatcatcagagtttgaaggcggagattgat
gccagagaggataatcttatggcgtgcattaatctcggaaaagacctgttagctagaaat
cattatgcaagcgcgcagataaaggagaaactggcagcattgaccgatcacaggaacgca
ctgttacaccgatgggaggaacgttgggagaacctgcaactcattttggaagtttatcaa
tttgctcgagatgctgcagttgctgaagcatggttaattgctcaagagccatatcttatg
agccaagagcttggtcatactatcgacgaagtcgagaatttaatcaagaaacacgaggct
ttcgaaaaatcggcagctgcacaagaagaaaggtttagtgccttgcaccgacttactact
ttcgaattgaaagaattgaaacgacgagagcaagaaagggaggaagaggaaagacgcaag
aaggaggaagcggcagcagcggaagccgcgcgtttggcaaaggcgacgcctgttactagt
ccagatgaaccacctagcgaaagagccgaaactgacgggactggagaacgcggagaagac
gagggacacgcacatcgcaaggcttcacgtacaccacagcctcaagacaagcccaaggaa
gtgcatgcacaaagacctagacagctggcttttcgggaaggagatggaactcagcctgtc
acgccaacatctgtgaaaactccgacgcatggtagccgcacgccgacaactccgaaaggc
tccgaggcttcaagacgtaaggaaagaagccgcagcaagtcaccattcaggagcttccgc
tggagaaagtccgccaagtcgccgagtttagatcgcagtggcgtgagtgatgatgagcac
agtattcctgaaccgcgaagtccgggtgacgacgagttcgaagggccgttgcagcgaaag
cacgaatgggaaagtacgacgaagaaagcgtccaatcgctcttgggacaaggtgtacatg
gtcgtacgcgggcagagcttatgtgtatataaagatcaaaagtcgtacaaagcctcgccc
gatcaaccgtacaaaggagaggctcctcttgacttacgaggcgcgactattaccgtagcg
agtgattacactaagaagaaacatgtcttccgagtaaagtcgcaaagcggatccgacttc
ctgttccaggccaaagacgataccgaaatgaacgactgggtgtccgcattaaatcaagcg
gcacaaggaacatcaggtgcaggcacatctagggctcacaccttgccagctccgacacaa
gccgaaactaagcgacgtagtttcttcactctcaagaaaaactaa
DBGET
integrated database retrieval system
