Solenopsis invicta (red fire ant): 105208077
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Entry
105208077 CDS
T03916
Name
(RefSeq) eukaryotic initiation factor 4A-I
KO
K03257
translation initiation factor 4A
Organism
soc
Solenopsis invicta (red fire ant)
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soc03019
]
105208077
03012 Translation factors [BR:
soc03012
]
105208077
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
soc04147
]
105208077
Messenger RNA biogenesis [BR:
soc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
105208077
mRNA cycle factors
Stress granule specific factors
105208077
Translation factors [BR:
soc03012
]
Eukaryotic type
Initiation factors
eIF-4
105208077
Exosome [BR:
soc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
105208077
Exosomal proteins of bladder cancer cells
105208077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Flavi_DEAD
tRNA-synt_1b
AAA_30
Helicase_RecD
TniB
CMS1
Motif
Other DBs
NCBI-GeneID:
105208077
NCBI-ProteinID:
XP_011176133
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All DBs
Position
1:complement(29869057..29876794)
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AA seq
423 aa
AA seq
DB search
MSHTAERRNDDQWSGDSKNGPSESEQPTYDGPPGMDPDGIIESNWDVVVENFDEMNLKEE
LLRGIYAYGFEKPSAIQQRAILPCIRGLDVIAQAQSGTGKTATFSISILQQIDTTIKECQ
ALILAPTRELAQQIQKVVIALGDFMHAECHACIGGTNVREDMRKLDQGVHVVVGTPGRVY
DMISRRALRASSIKLFVLDEADEMLSRGFKDQIHDVFKLLPNEVQVILLSATMPSDVLDV
SKCFMRNPIRILVKKEELTLEGIKQFFVYVEREDWKLETLCDLYDTLSITQAVIFCNTRR
KVDWLTESMHKRDFTVSAMHGDMEQKERDLIMRQFRTGSSRVLITTDLLARGIDVQQVSL
VINYDLPSNRENYIHRIGRGGRFGRKGVAINFVTEEDKRTLKDIEQFYNTHIDEMPMNVA
DLI
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcatactgctgagagaagaaatgatgatcaatggtcaggggattcaaaaaatggt
cctagtgaaagtgaacaacccacatatgatggaccacctggaatggaccccgatggcatc
atcgagtccaattgggatgttgttgtggaaaactttgatgaaatgaacctgaaagaagaa
cttttacgtggtatttatgcttacgggtttgagaaaccatccgcaattcaacaacgtgcc
atcctaccatgtataagggggctcgatgttattgctcaggcccagtctggtactggaaaa
actgcaacgttctcaatatcaattcttcaacaaatagacactactattaaagaatgccag
gccttgatccttgcaccaacccgtgaattagctcaacaaatccagaaagtcgttatcgct
ctaggagatttcatgcacgcggaatgtcacgcgtgcattggtggcaccaacgttcgtgaa
gatatgcgaaaactggatcagggtgttcacgtggttgttggtacgcccggtagagtttat
gacatgatcagccgacgagcacttcgagcaagtagcatcaaacttttcgtgctggatgag
gccgatgaaatgttatctcgaggatttaaggatcaaatccatgatgtattcaagctatta
cctaacgaagttcaggttatattattatctgcaacaatgccatctgacgtgttggatgta
tccaaatgttttatgcgtaatcccattcgaattttggttaaaaaagaagagctaacatta
gagggtataaagcaatttttcgtttacgtcgaacgcgaagattggaaattggagactctt
tgtgatttatacgatacattgagcattacccaggccgttatcttctgcaatacgcgacgt
aaggtagattggctaacagagagtatgcataaacgcgacttcactgtttccgctatgcat
ggtgatatggaacagaaggagcgcgatcttatcatgcgtcaattccgaactggatcatct
cgagttttgattaccactgatcttctggcacgtggtattgatgtacaacaagtttctctt
gttattaactatgatttaccttccaaccgagaaaactatattcatcgaattggtcgtggt
ggtcgttttggccgtaaaggtgtggccattaactttgtgacggaagaagataaacgaacc
ttaaaagatattgagcaattttacaacactcacatcgatgaaatgccaatgaatgtcgct
gatctgatttaa
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