Solenopsis invicta (red fire ant): 105208095
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Entry
105208095 CDS
T03916
Name
(RefSeq) WD repeat-containing protein 36
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105208095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
soc03009
]
105208095
Ribosome biogenesis [BR:
soc03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
105208095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_DCAF4
Beta-prop_TEP1_C
Beta-prop_EIPR1
PEP5_VPS11_N
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_VPS8
Beta-prop_IFT140_1st
Beta-prop_WDR75_2nd
WDR90_beta-prop_4th
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_LRRK2
Beta-prop_Nup120_160
Utp12
ApoB100_C
Motif
Other DBs
NCBI-GeneID:
105208095
NCBI-ProteinID:
XP_011176157
LinkDB
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Position
1:30607549..30610579
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AA seq
889 aa
AA seq
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MVQSKIFARNRALGYVSNSVPLVTRYILRRKEHLIVTCVGKEFHTYGCKHFTLMSVSGTH
PDDITCLVTDTFHVYTASANKIFAWRRGTELKHTYEGHDCTVHILLPFGAHLLSVDVNST
LKVWSIKEESLLLELNFSNTIFRITALMHPNTYMNKILLGSEQGQLQLWNIKLPKMVHTF
KGWQNSVMALEQAPAIDVAAIGLFNGRIILHNLKYDETIFELVQDWGPVISISFRTDGSP
IMATGSMSGQIVLWNLEQRTVESQLCKAHNSSVTGLKYIPNEPLLVSSSPDNSLKLWIFD
VADGAGRLLRIREGHSDPPTIVRFYGNDGNYLLTTGGDSSLRLFSTVTEIMNKSLGRASF
NRKASKKKGHSVDDPMLMPPITELASEITREKEWCNIAATHSGLGMVTTWSSHLQKMGDL
KLLPERFKSNSNFVTATTLCLTRCGNFVVIGYSTGHVERFNIQSGIHRASYGDESGAHEG
PVKGVMVDDLNQTLITAGKDAKIKFWDFKPKKDINMAKTILIMEDSIEWIRCHNESSLVA
IALQNFDVMLMDVDTRKIVRHFQGHEGRVTDACFNPDSRWLITASMDCTIRTWDIPSSHL
IDIFQVPEACISLSFSPTAEFLATAHVRHLGIFLWSNRMLYSHVSLKAISKDDIIPEVEL
PGYSKEVEKTDEDDVLIEEPDYVSPDQLDSDLITMSAVAQSRWQNILDIDIIKKRNKPKQ
PPKFPETAPFFLPTIPSLELRFDLPDVPKTNENVKSTRVHPTLQNVTSFNKSLQSITNNF
SDVIEKLKAMSPNNIDFEIQSLSLDENSAELAVLQFMKMLHYMMEQQTDFELSQAYLAVF
LKWHGPIILENDMLRDYLKKIQEAQMRNWSTLREKLFYNLSVVQHLKKM
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atggtgcaaagtaaaatattcgcgcgaaatcgagcgcttggatatgtcagcaatagcgta
cctctcgttacgaggtatatcctcagaagaaaagaacatctcatcgtcacgtgcgtaggc
aaggagttccacacttatggatgtaaacattttactctgatgagtgtttcgggtacgcat
cccgacgatatcacctgcctggttacagacacgtttcacgtgtacacggccagtgcgaat
aaaattttcgcgtggcgcagaggaacagagttgaagcacacttacgagggtcacgattgt
acggttcacatattgttgccattcggcgcgcacttgctctctgttgacgtaaacagcacc
ttgaaggtatggagcattaaggaggaaagtctcttgctggagttgaactttagtaacacc
atcttcaggataactgcgttgatgcatcccaacacgtatatgaacaagattctgctgggc
agcgaacagggccagctacaactgtggaacatcaaactgcccaagatggtacacacgttc
aagggttggcagaatagtgtgatggcgttggagcaagcacccgcgatagacgtggctgct
ataggtttattcaatggtcgcattattctgcataatctcaaatatgacgagactattttt
gagcttgtgcaagactggggcccggtgatatccatcagctttcgtactgacggttccccc
atcatggcgacgggcagtatgtctggtcagatcgtattgtggaatttggagcaacgaaca
gtggaaagccagctatgcaaggcacacaactcttctgtcacaggtctaaaatatatacca
aacgagccattattggtttcgtcttcgccagacaactctcttaaactatggatatttgat
gtggctgatggcgccggcagactcttaaggattagagaaggacactctgatcctccaaca
attgttcgattttatggaaatgatggcaattatctgttgactactggtggtgattcctca
cttcggctattttctactgtcacggagataatgaacaaaagtctgggtagagcctcgttt
aacaggaaagcctctaagaaaaagggtcactcagttgacgatccgatgttaatgccgccg
ataactgaacttgcatccgagataacgcgggaaaaggaatggtgcaacatagcagctact
cattctggtttaggcatggtcactacatggtcgtctcaccttcaaaaaatgggcgacctg
aagttgcttcccgagagatttaaaagcaattctaattttgttactgcaaccaccttgtgt
ttaacaagatgtggaaattttgttgtaatcggttatagtacgggccatgttgagagattt
aacattcagtcagggatccatagagcatcctatggggacgagagtggcgctcacgagggt
cccgttaagggtgtcatggttgacgatttgaatcaaactctcatcacagctggcaaagat
gcaaaaatcaagttttgggattttaaacctaaaaaagatataaatatggcaaaaacgata
ttaataatggaagactcgatcgaatggatacgatgtcataatgagagttcccttgtggct
atagccttgcaaaattttgatgttatgctaatggatgtagatacaaggaagatagttcgt
cattttcaagggcacgaaggacgagtaacagatgcttgtttcaatcctgattctagatgg
ctaatcacagcatctatggattgcacaatccgcacttgggatataccatcgtcacactta
atagatatctttcaggttcctgaagcttgtatatctttaagtttctctccaacggcagaa
tttcttgcgaccgcacatgtacgtcacttaggtatctttttatggtcgaatcgtatgctc
tattcgcacgtttcgttgaaagctattagcaaagacgatataatacctgaagtagaactt
cctggatattccaaagaagttgagaaaactgatgaggacgatgtccttattgaagagcca
gattacgtgtctcccgatcaacttgacagtgatcttataactatgtctgccgtggctcaa
tctcgatggcagaatatactcgacatcgatatcattaaaaagagaaacaagccgaagcaa
ccgcctaaatttccagagacggcgccgttctttttgcctacgattccatcattggaatta
cgttttgatctccctgatgtcccaaaaactaacgaaaacgtcaaaagtactcgtgtccat
cctactttacaaaatgttacttcgttcaacaagagtcttcaatcaattaccaacaatttt
tcggacgtgatagaaaaactgaaggcgatgagtcccaacaatatcgatttcgaaattcag
tcattatctttggatgagaattctgctgaattagcagtactacagtttatgaagatgctt
cattacatgatggaacaacagacagattttgaattgtcacaagcgtatttggcggtgttc
ttaaagtggcatggtccaataatcttggaaaatgatatgttacgagattacctgaaaaaa
attcaggaagcgcaaatgagaaattggtctacgctacgagagaaattattttataactta
agtgttgtacaacatttaaaaaaaatgtaa
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