Solenopsis invicta (red fire ant): 105208165
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Entry
105208165 CDS
T03916
Name
(RefSeq) low-density lipoprotein receptor-related protein 6 isoform X3
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc04150
mTOR signaling pathway
soc04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
105208165
04150 mTOR signaling pathway
105208165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
soc04131
]
105208165
Membrane trafficking [BR:
soc04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
105208165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
EGF_LRP2
SGL
DUF5050
Vgb_lyase
cEGF
PRKCSH-like
EGF
Motif
Other DBs
NCBI-GeneID:
105208165
NCBI-ProteinID:
XP_011176230
LinkDB
All DBs
Position
13:complement(1513566..1551032)
Genome browser
AA seq
1634 aa
AA seq
DB search
MITRNSWLTIVCLLCYGVFSCNGSPLLLFATHKDIRVANMSRGNKVNIIIKDLSEGASLD
FFYERGLVCWSDSGLEMIQCIRYNGTHTGERITVVNSSLISPDGLACDWFTDKLYWTDGE
KNRIEVTSVDGRNRKVLFWTEIYQPRAIALAPMEGLLFWTDWGDIPKIERASMDGNPSTR
EIIVSDDIFWPNGLTIDYENKLVYWADGRLWFIAVMDYSGNNRRKLITRDLDYPFAITFF
DNRLYWTDWKTWCIHSYDMNQPQSHPRELFHGEYIPGSDIEVWDAKRQPGGNNPCRHNNG
NCSHLCLLSSEKPGFSCACPTGVKLIDNYTCASRPEQLLLIVQRTEICRISLDSPDYTNF
ALPLTGIKHAIAIDFDPVDELLYWSDEQTTAIRRAPLDGSSQQNVISTEIANPDGIAIDW
IARNLYWTDTGTDRIEVARLDGKYRRVLVNEDLSEPRAIAVAPEHGWMFWTDWSEKRPKI
ERSNLDGSERILLITKDIFWPNGIALDFERKKIYWCDAKTDKIEVSNMDGTDRREVITDN
LPHLFGLTLLGDYLYWTDWQRRSIDRAHKLTGSDREIIVDQVPNVMGIKAVHLGRVNVSN
SPCARDNGGCSHLCFNRPNNRYVCACQMGYELTKDKRTCVVPDAFLLFSRRENLGRISIE
NVNNDNIIPVTGIKDASAIDFDLSENRIYWTDIKLKTITRVFINGSDIEKIVDLGLESPE
GIAFDWIAHNLYWSDTITRRIEMIRIEGGSRKILVWQNLIDPQNMAVDPQKGHLYWAEWG
NAGSIERALLDGTQRQVIVSNIGRANGLTIDHVGRKLYWADISAPAIVCYDLLTQRKDSI
ISHHIVYPFSVTQYRDYIYWADWNTGDIERADKLTGANRTKIHTNLASVTDLKVFHASRQ
AGSNPCAIANGNCSHLCIALPGLNNGTSITHRCACPTHYNLARDNRTCMAPRHFMIYSLK
TTIARYLPDQTTDCADVTLRIQGLKNVRAIEFDPVTQHVYWIDGRVTIRRALENRTQQQH
SSSVVVSIGNGHLFDLALDPLGRLLFWTCSTNDALNVTRLDNGSALGVVVKGDGEKPRHL
AIYSEQRLLFWTDVGKKRVIRSKMDGKERHVIANDLSEQPTGLTVDTTMYIVYWASGKHI
ECSNFEGGNRKLLASTTQGSALHLAILFDYLYWYDRDAQVIERVNKTFDGSTRRGMHVTS
RMSFTDLIAINMPEDSLMETHVCSPFNDYGGCSHFCVGTSTIADEATATLPRCSCPKSLV
LSDDGRTCRAAPVCGNDHFTCAAPNAAVSKDCIPAIWKCDGQTDCSDGSDELGCPVCSRD
QFRCQNHCIELSWVCDGTQQCPDGSDEAQCCQPGQFQCVGNGVCISLNLRCDGWDDCADG
SDELPTICLSAHNPHRQNAGPDINESSKVTYIITILAVVFVVIAGLLSYYYCRKRFTGNE
GLPDILHDSAGDPLSPKPSNNRMVKPMFVSQKNRKDAGSSGGLKVGMEAVRMSMLNGSSL
GSSYDRSHITGASSSTRGSSAGGYPQETLNPPPSPATIVSSTRCSSSNASRYKPYRHYRS
INQPPPPTPCSTDVCDESDSNYPARYRYESEPFPPPPTPRSVYHSDAAISCPPSPSSRSS
TYFSPLPPPPSPVP
NT seq
4905 nt
NT seq
+upstream
nt +downstream
nt
atgatcacgcggaactcctggctcaccattgtttgcctcctctgctacggcgtcttttcc
tgcaatggctcacctcttcttcttttcgccactcacaaggacatcagagtggccaacatg
tcccgtggcaacaaggtcaatatcatcatcaaggacctgtcggaaggtgcatccctggac
tttttttatgaacgtggactggtttgctggtccgacagtggtctcgagatgatacagtgc
atacgctacaatggtacacacacaggcgagagaataacggtggtaaactctagtctgata
tcgcccgacggtctcgcatgcgactggtttacggataagctgtactggacggacggcgag
aagaatcggatcgaggtgaccagcgtcgacggccgtaacaggaaggtgctcttctggacg
gaaatctatcagccgcgcgcaatcgctctggcgccgatggaagggctcctcttctggacc
gactggggcgacatacctaagattgaacgcgcctcgatggatggtaatccaagcacccgc
gagatcatcgtctctgacgacatattctggccgaacggcctgacgattgactatgagaat
aagctcgtctactgggcggatggtagactatggttcatcgccgtcatggattacagcggc
aataacagacgcaaattgattactcgcgatctggactatccgtttgccataacgtttttc
gacaatcgactctattggactgattggaagacctggtgcatccactcgtacgacatgaac
cagccgcaatcgcatccccgtgaattgtttcatggcgaatacatacctggtagtgatatt
gaagtctgggatgcaaagaggcagccaggtggcaataacccttgcaggcacaacaacggc
aactgttctcatctgtgtcttttgagctcagagaaacctggtttcagctgcgcctgtccc
acgggcgtgaagttgattgacaattacacgtgcgccagcaggcccgagcagctgctgcta
atcgttcaacgaaccgaaatctgccggatatccttagattcgcccgattatacgaacttt
gcattgccgctcaccggtattaagcatgcaatcgcgattgacttcgatccggtggacgaa
ttactgtactggagtgacgaacaaacaaccgccatcaggcgagctcctctagacggatcc
agtcagcagaatgtcatttctacggagattgcgaatccagatggcattgcgatagactgg
atcgctcgcaatctctattggaccgataccgggaccgatcgaatcgaagtggcgcgacta
gatggtaaatatcggcgtgtgctggtgaacgaagatctgtctgagccgcgggcaatcgcg
gtcgcgcccgagcacggctggatgttctggaccgattggagcgagaaacggcctaaaatc
gaacgcagcaatctcgatggtagcgagcgtatcctacttattaccaaagatatcttctgg
ccaaacggtatcgccctggactttgagcgtaagaagatctactggtgcgacgcaaagacc
gataaaatcgaagtatcgaatatggatggtaccgatcggcgtgaggtgatcactgacaat
ctgccgcatctgttcggtctcactctactgggcgattacctctactggaccgactggcag
cgtcgcagcatcgatcgggcacacaagctcactggtagcgatcgtgaaatcattgttgat
caggtgccaaacgtgatgggaatcaaagctgtgcatcttggccgagtgaatgtcagcaat
tcaccatgcgcacgcgacaatggtggatgcagccatctgtgcttcaacagacccaacaac
aggtatgtctgcgcctgccagatgggctacgaattgaccaaggacaagcgcacgtgcgtt
gtaccggatgcctttttgctgttttccagaagagagaatcttggccgaatcagtatcgaa
aacgtcaacaatgataatatcatacctgttaccggtatcaaagacgccagcgctatagac
tttgacttgtccgagaaccgcatttattggacggatattaagctaaaaaccatcacacgt
gtcttcataaatggttcagatatcgaaaagatagtcgatctcggcttagaatcaccagaa
ggtatagcattcgattggattgcgcacaatctttattggagcgacacgatcacgcgtaga
atagagatgataagaatagaaggaggtagcaggaaaatacttgtgtggcaaaatcttatt
gaccctcaaaacatggctgtagatcctcagaaaggacatctatattgggccgaatggggt
aatgccggtagcattgagagggccttgttagatggcacgcagcggcaagtgatcgtctcg
aacattggtcgagcgaatggtttgacaatagaccatgtgggtcgcaaattgtactgggca
gacatctctgcgcctgcgattgtttgttacgatttactgacgcaacgcaaggattccatc
atttcgcatcacatagtctatccgttcagcgttacgcagtatcgagactacatctattgg
gccgattggaacacaggtgatatcgagagagcggacaaactcactggggcgaatcgcacc
aagatccacactaatctagcgtcggtgacggatctaaaagtgtttcacgcttcgcgtcag
gccggttcgaatccatgtgcgattgcaaatggcaattgcagccatctttgtatcgctctg
ccgggtctaaacaacggtacatccatcactcacagatgtgcgtgtcccacacattacaat
ctagcgcgagacaatcgaacttgtatggcaccacgacatttcatgatctacagtctgaag
actacgatcgcacgttatttacccgatcagacgactgactgcgcggacgtgacattacgt
atacaaggtttgaaaaacgtccgcgcgatcgagttcgatccagtaacgcaacatgtttac
tggatcgatggtcgtgtgacgattcgtcgtgccttagagaaccggactcaacaacagcac
agcagctcagttgtggtatccattggaaatggtcatttatttgaccttgcgctggaccca
ctcgggaggctgcttttttggacgtgctcgacgaacgatgctctcaatgtcacacgtctg
gataacggttcggctctcggcgtcgtagtgaaaggtgatggcgagaaaccgcgtcatcta
gcgatttactcggaacagcgattgctcttttggacggatgttggcaagaagcgggtgata
cgcagcaagatggacggcaaggagcgccacgtgattgctaatgatttatcggaacagccc
accggcttgacagtagatactacaatgtacatcgtctactgggcgtctggcaagcatatt
gaatgctccaattttgaaggcggcaatcgcaagctcctggcctccaccacgcagggctcc
gcattgcatttggctatcctgtttgattatctctactggtacgatcgtgatgcacaggta
attgaacgagttaacaagacatttgacgggagtactaggcgaggcatgcatgtgacgagt
cgtatgtccttcacggatcttatcgcgatcaacatgcctgaagattcgctcatggagaca
cacgtgtgcagcccgttcaatgactatggtggttgctcgcacttttgcgttggcaccagt
actattgccgacgaggccactgcgacgttacctcgttgctcatgcccaaagtcgttggtc
ttgtctgacgacggccgtacttgtcgtgcagcgcctgtctgtggaaacgatcatttcacg
tgcgccgcgccgaacgcggccgtgagcaaggattgtatcccagctatatggaaatgtgac
ggccaaaccgattgttcagatggtagcgacgagctgggatgtcccgtgtgctctcgcgat
caattcagatgtcagaatcattgtatcgaattgtcttgggtatgcgatggaactcagcaa
tgcccggatggttcggatgaggcacaatgctgtcaacccggacaatttcagtgtgtcgga
aatggtgtctgcatttcactgaatttgcggtgcgacggctgggatgactgtgccgacggc
agcgacgagctaccaacaatttgtctcagtgcgcacaatccgcaccgccagaatgccgga
cccgatatcaacgagtccagcaaagtgacttacatcatcactattttggcagtggtattc
gtggttatagcaggtcttctaagctactactactgtcgcaaaagatttaccggaaacgag
ggtctgcctgacatattacacgattcggcgggagatccgctgtcgccaaaacctagcaat
aatagaatggtcaagccgatgtttgtttcgcagaagaataggaaagatgcaggatcaagc
ggaggtctcaaggtcggaatggaagctgtaagaatgtccatgttaaatggaagcagtctc
ggttctagttatgatcgcagtcacattacaggtgcgtcaagttctaccagaggaagctcc
gctggtggatatcctcaggagactctaaatccgcctccaagtccagctacgatcgtcagc
tcgacgcgttgctcgagtagcaatgcgtcgcgttataagccatatcggcactatcggagt
atcaatcaaccgccaccaccgactccgtgtagcaccgacgtctgcgacgagtcggatagc
aattatccggcgcgctatcgttacgagagcgaaccatttccgccaccgcccaccccacgt
tccgtctatcacagtgacgcggcgatcagctgtccaccgtccccaagctccagatcgtcc
acttatttcagtcccctaccgccaccaccgtcgccggtgccttga
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integrated database retrieval system
