Solenopsis invicta (red fire ant): 120358858
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Entry
120358858 CDS
T03916
Name
(RefSeq) zinc finger BED domain-containing protein 4-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
soc
Solenopsis invicta (red fire ant)
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
soc03000
]
120358858
04121 Ubiquitin system [BR:
soc04121
]
120358858
Transcription factors [BR:
soc03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
120358858
Ubiquitin system [BR:
soc04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
120358858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
DUF659
hAT-like_RNase-H
Zn_SUZ12
MULE
Motif
Other DBs
NCBI-GeneID:
120358858
NCBI-ProteinID:
XP_039310411
LinkDB
All DBs
Position
10:1800069..1803493
Genome browser
AA seq
685 aa
AA seq
DB search
MDTRNDDNNKAFEYVSNLCESGKIVNNEEIEKLFRSIDDVDFTLIKSTEEDDARDPQVVA
QEEITPTEAPPESLKHSGVTKSKSMSKHSSAVWQYFEREINNTARCTICNKVYKHCGNTS
NLLQHLNGRHALFCSQAVRLKQKQKARVTSESSDDRDDLDGPPPKQVKFKPQKEASDKIT
NAILYMIAADKMPLSIVQNDGFQWVIKTLAPLYTMPSRKTVTRLIDVRYEVLKNRFISTL
KEVDSYSITCDNWTDVGNQSYLGVTIHYVTKQIEMKNGCIGVFPMSENHTSQYLRECLNS
VVEDFNLDQSKIMAVVTDKAANIKKAVRDFMGQDKHVACFAHTLSHLVPDVLVAMPIVRD
TIAKVKAIVTVTKRSVVASDELKKLQMRDGKTEGTALKFIQDVPTRWNSTLYMLERFVAL
EEYVYPVMSKCPSAPDMLKREEMQMLNDVISLMKPVERVITEVSGDSYPTCSVIIPLVRC
LKVAVRECNPLTRCGIEFKEKLEKAINIRFKDFELHKILAISNILDPRFKKIHFESALAA
SSAISQINDYIQKDTVQKTYNKESVESIVKTDVWSFHDHLVANKADYSTHSEDISFEIRQ
YLSQPVIRRQENPLKYWSSMKLAFPSLYKLALNYVSIIGTSVPSERLFSEAGNIKTDNRS
RLSGEHLNKLLFLSSLSREDWSCLE
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggataccagaaacgatgataataataaggcattcgaatacgttagcaatctgtgcgaa
agtgggaagattgttaataacgaagaaatcgagaaactgtttcgatccattgatgatgtg
gatttcacattgatcaagagtacagaggaggatgatgctcgagatcctcaagtggtagcc
caagaggagatcacgccgactgaagccccaccagaaagtttgaagcattcgggcgtaaca
aagagtaaatctatgtcaaagcactcgagtgctgtgtggcaatatttcgaaagggaaatt
aataatacagcccgctgtacgatttgcaataaagtgtacaaacattgcggaaacacatcg
aacttacttcagcaccttaatggacgccacgcgttgttttgctcccaagctgtcagactg
aagcaaaagcaaaaggctagagtgacttccgaatctagtgacgatcgtgacgatcttgat
ggccctccaccgaaacaagtaaaattcaaaccacagaaggaggcttctgacaaaattaca
aatgccattttgtacatgatcgcggccgataaaatgccattatctatagtgcaaaacgac
ggctttcaatgggtcataaaaacattggcacctctctacactatgccgagcagaaaaacc
gtgacaagattgatagacgtccgatatgaagtattgaaaaaccgctttataagcaccctc
aaggaagttgactcttattctataacatgcgataattggacagatgtcggcaaccaaagt
tatctcggcgtcaccatccactatgtaactaaacaaattgaaatgaagaatggatgtatt
ggagtttttccgatgagtgaaaatcacacatcacagtatctcagagagtgcttaaattca
gtcgtggaggacttcaatttggaccaatcgaaaattatggcagtcgttacagataaagcg
gccaacatcaagaaagctgtacgcgactttatgggacaggacaaacatgtggcctgtttt
gcgcatactctatctcatctcgtaccagacgtactagtcgctatgcccattgtgcgggat
acgattgcaaaagtgaaggctatagtcacagtcacaaaaagaagcgtcgtggcttccgat
gaattaaagaagttgcaaatgcgagacggaaaaacggaaggaactgcattgaaatttatt
caagatgttcctacacgttggaactcgacgctctacatgctagaaagatttgtcgctctc
gaggaatatgtttatccggttatgtcgaagtgtccgagtgcaccagatatgttaaaacga
gaagaaatgcaaatgctgaacgatgtcatatccctcatgaaaccagtcgagcgtgtcatc
actgaagtcagtggagactcctatccaacatgtagcgttatcatcccgttagttcgatgc
ttgaaagtggccgttcgagaatgtaaccctttaacaaggtgtggaatcgaatttaaagaa
aaactcgaaaaagcgattaatatacgatttaaagattttgagttgcacaaaatactagca
atttcaaatatactggatccaagattcaagaaaatccactttgagagcgctctggctgct
tcttctgcaatatcgcaaattaatgattacattcagaaggataccgtacaaaaaacgtat
aacaaagaatccgttgaatcgatagtaaagaccgatgtctggagctttcatgaccacttg
gttgcgaacaaagctgactacagtactcacagcgaagacatcagtttcgaaataagacaa
tatttgagccaaccagtcatccgacgtcaagaaaaccctcttaagtattggtcatcgatg
aagctcgcgtttccgtcattgtataaattggcattaaactacgtcagtattattggaaca
tcggtgccatccgaaaggctgttttctgaagctggtaacatcaaaaccgacaatcggagt
agactatctggtgagcacttaaataaactgctgtttcttagttcgctttcacgagaggat
tggagttgtttggagtaa
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