Solenopsis invicta (red fire ant): 120359294
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Entry
120359294 CDS
T03916
Name
(RefSeq) lissencephaly-1 homolog
KO
K16794
platelet-activating factor acetylhydrolase IB subunit alpha
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc00565
Ether lipid metabolism
soc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09100 Metabolism
09103 Lipid metabolism
00565 Ether lipid metabolism
120359294
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
soc03036
]
120359294
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
soc04147
]
120359294
Chromosome and associated proteins [BR:
soc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
120359294
Exosome [BR:
soc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120359294
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_EML
NBCH_WD40
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_Nup120_160
LisH_PAC1
Beta-prop_Vps41
Beta-prop_RIG_2nd
eIF2A
Beta-prop_DCAF12
Beta-prop_DCAF4
LisH
Beta-prop_IFT140_1st
Nucleoporin_N
Beta-prop_WDR75_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
WD_LRWD1
Beta-prop_WDR11_2nd
Beta-prop_NUP159_NUP214
Pox_A_type_inc
Motif
Other DBs
NCBI-GeneID:
120359294
NCBI-ProteinID:
XP_039312216
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All DBs
Position
12:9007576..9024234
Genome browser
AA seq
410 aa
AA seq
DB search
MKMVLSQRQREELNKAIADYLSTNGYQDALEAFKKEADMPGEVERKYGGLLEKKWTSVIR
LQKKVMELESKLSEAEKEFIEGAPTRGKRSPSEWIPRPPEKFCLSGHRAPINRVIFHPVF
SLIVSASEDATIKVWDFESGDFERTLKGHTDSVQDIAFDTSGKLLASCSADMSIKLWDFH
QSFACVKTMHGHDHNVNSVAFMPQGDFVVSASRDKTIKIWEVATGYCVKTLTGHREWVRM
ARVSPCGELIASCSNDQTVRVWHVATKETKVEFREHEHVVECIAWAPDNARASINAAAGA
DNKGAHEGPFLASGSRDKMIRVWDVGAGVCLFTLVGHDNWVRCIVFHPGGKFIVSASDDK
TLRVWDTRNKRVMKTLEAHLHFCTSVDFHKNHPYVVTGSVDQTVKIWECR
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggtgctgtctcaacgtcagagggaggagttaaataaggcgatcgcggattac
cttagcacgaacggctatcaagatgcactggaggcatttaagaaagaagccgatatgccg
ggagaggtggagaggaagtacggaggcctcttggagaagaagtggacctcggtcatacgg
ttgcaaaagaaggtaatggaattggagtctaaactctccgaggcggagaaggagttcata
gaaggtgcgccaacgcgtggcaagagatcgccgtccgaatggataccgaggccgccagag
aagttctgtctatccggacatagagcccctattaatagagttatttttcacccggttttt
agtcttatagtatccgccagcgaagatgctaccattaaggtatgggactttgaaagcggc
gacttcgagagaacgttgaagggccacactgacagcgtgcaggatatcgcattcgacacc
tcgggcaagctgctcgcctcctgcagtgcagacatgtccatcaagctgtgggatttccat
cagtcgttcgcttgcgtcaagaccatgcacggtcacgatcacaatgtcaactcggttgcg
tttatgccgcagggtgatttcgtagtaagcgcctccagggataagaccatcaagatctgg
gaagtggcaacgggctactgtgtgaaaacacttacgggacacagggaatgggtgagaatg
gcgcgagtcagcccgtgtggtgaactcattgccagctgctcgaacgatcagactgttcga
gtgtggcacgttgcgacgaaggagacgaaggtcgagttcagggaacatgaacatgtggta
gaatgcatcgcatgggcaccggacaacgcgagggcgtcgatcaacgcggctgccggagcg
gacaacaagggcgcgcacgaagggcccttcctcgcttccggctcacgggacaagatgatc
cgcgtgtgggacgtcggcgccggagtgtgcctcttcactctcgtcggacacgacaattgg
gtgcgatgcatcgtcttccatcctggcggcaagtttatcgtcagcgcgtccgacgataaa
acgctgcgagtctgggacacgcgcaataagcgagtgatgaagaccctcgaagcgcacctt
cacttctgcacttctgtcgatttccacaagaaccatccttacgtggtcaccgggagcgtc
gatcaaacggtgaagatttgggagtgccgctag
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