Sodalis praecaptivus: Sant_0182
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Entry
Sant_0182 CDS
T03004
Symbol
yhjK
Name
(GenBank) Biofilm formation regulator
KO
K26149
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
sod
Sodalis praecaptivus
Brite
KEGG Orthology (KO) [BR:
sod00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
Sant_0182 (yhjK)
Enzymes [BR:
sod01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
Sant_0182 (yhjK)
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Gene cluster
GFIT
Motif
Pfam:
EAL
GAPES3
GGDEF
HAMP
CHASE8
PGM1_C
Motif
Other DBs
NCBI-ProteinID:
AHF75298
UniProt:
W0HT16
LinkDB
All DBs
Position
204683..206701
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AA seq
672 aa
AA seq
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MEKSLRIRRSLTIKQMATVSGVALVTICLFIVIQLFHFVSQRREDYTQQLQNIAMSVRQP
LSSAVLKADIPQAEQILVTLKRGGILSRADVVLPNNVQVLHGDFPPERPVPALISRLFRL
PVEVQVPLYSLPRPSHPQALAYLVLQADSYRLYQFIVSAIATMITTYLLLALIMTVAITW
CINRLMVHPLRAIARELENLAPEDMASHQLTLPNMHRDDELGVLVRSYNRNQHVISRGRQ
DLEQRVTPLAAAGLPTRARFLAMLDAPLATHVETGSYCLLVIAVTTLPEATGVLTESQRD
LLYTSLANRLRRDCGATSLLAQLHPHEFALCHWATEPPFQAMALAQRVLSIINGPLTIGN
LALRPAAGIGVAFGALEDKNAEKVLNHAALAASSAAARGRNQILFFEPALAVAATRRLTF
AHRLLEGIAQGRCALFFQPQVDMRDQRLLSAEALLRWRQDDGSWSLPEDFICQVEAAGVM
VPLGNWVLEEACRVLGEWQGRGIAVPLAVNLSALQLQQNDLVSSLKQSLARFQVGCSQLV
LEITETARINEFASSFQVLRELHDLGIVIALDDFGMGYSSLYCLDRLRHLPIDMVKIDRS
FIATLPEDAIMLRVVSAIADVLDLPVIAEGVENAAQRDCLLAHHIHRGQGYLFAEPLTQQ
AFEHRFFNRPCS
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaagtttgcggatcagacgttctttaacgatcaaacaaatggcaacggtgtcc
ggcgtggcattggtgactatttgtctattcatcgtgatccagcttttccattttgtttcg
cagcgccgtgaagactacacccagcaattgcaaaatatcgccatgtcggtccgccagccg
ctgtccagcgcggtgctcaaagccgatattcctcaggcggaacagattctggtcaccctt
aaacgcggcggcatactgagccgcgcggatgtggtgctgccgaataatgttcaagtgttg
cacggcgattttccgcccgagcggccggtgccggcgctgataagccgcctgttccgcctg
ccggttgaggtgcaggtgccgctttattccctgccgcggccttctcatccgcaggcgctg
gcttatttggtactacaggccgactcatatcgtctgtatcaatttatcgtcagcgcgatt
gcgacgatgataaccacgtatttgctgttggcgcttatcatgacggtcgccatcacctgg
tgcatcaatcggctgatggtccatccgctgcgcgcgattgcccgcgagctggaaaacctg
gcgccggaggacatggcttcccaccagcttaccctgccgaatatgcatcgggacgatgaa
ttgggggtgctggtgcgcagctacaaccgcaatcagcatgtcatcagccgcggccggcag
gatctcgagcagcgggtgacacccctcgctgcagccggtttgccgacccgggcgcggttt
ctcgcgatgctggacgcccctcttgcaacgcatgtggaaaccgggtcgtattgcctgttg
gtgattgcggttacaacgttgccggaggcgacgggcgttttgaccgaatcgcagcgtgac
ctgctgtacaccagcctggcaaaccggttaagacgggattgtggcgccaccagcctgctg
gcacagttgcacccgcatgaattcgcgctgtgccattgggccacggaaccgccgtttcag
gccatggcgctggcgcagcgcgtgttatccattattaacgggccgctgaccatcggcaat
ctggccttgcgccccgccgccggtatcggcgtcgctttcggggcgcttgaggacaaaaac
gccgagaaggtcctgaaccacgccgcgctggccgcatcctctgcggcggcgcggggtcga
aaccagattctgtttttcgagcccgcactggcggtcgcggcgacccggcggttgacgttt
gcccatcgtctgctggaggggatcgcgcagggccgctgcgcgctattcttccagccgcag
gtcgatatgcgcgaccagcggcttttgagtgccgaagccctactccgctggcgccaggac
gacggcagttggagcctgccggaggatttcatttgccaggtggaggcggcgggcgtcatg
gtgccgctgggcaattgggtgctggaggaggcgtgccgggtactcggcgaatggcagggg
cgcggtatcgccgtgccgctggcggtgaacctgtccgcgctacaattgcagcaaaacgac
ctggtgtcgtcgctaaaacagagcctggcgcgttttcaggtcggatgctcgcaattggta
ttggaaatcaccgagaccgcccgcattaacgaattcgcctcctcgttccaggtgctgcgc
gagctgcacgacctcggcatcgtcattgcgctggacgatttcggcatgggttattccagc
ctatattgcctcgatcgcctgcggcatctgcctattgatatggtgaaaatcgaccgcagt
tttatcgccaccttgcccgaggacgccatcatgctgcgggtagtgagcgccattgccgac
gtgcttgacctgccggttatcgctgaaggggtggaaaacgccgctcagcgtgattgtctg
ctggcgcaccacattcatcgcggccaggggtatctcttcgccgaaccgctaacccagcag
gcgtttgaacaccgcttcttcaatcgaccctgctcctaa
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