Sodalis praecaptivus: Sant_0286
Help
Entry
Sant_0286 CDS
T03004
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
sod
Sodalis praecaptivus
Pathway
sod03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sod00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Sant_0286 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sod03019
]
Sant_0286 (rhlB)
Enzymes [BR:
sod01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Sant_0286 (rhlB)
Messenger RNA biogenesis [BR:
sod03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Sant_0286 (rhlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
AHF75396
UniProt:
W0HNE9
LinkDB
All DBs
Position
complement(323998..325284)
Genome browser
AA seq
428 aa
AA seq
DB search
MSKTHLTEKKFSDFALHPLIVEALDSKGFNNCTPIQALTLPITLAGKDVAGQAQTGTGKT
LAFLTATFHHLLTHPAAEGRQTNQPRALIMAPTRELAVQIHSDAEPLAQATGLKMGLAYG
GDGYDKQLKVLEAGVDILVGTTGRLIDYTKQNYVNMGAIQVVVLDEADRMFDLGFIKDIR
WLFRRMPAAAERLNMLFSATLSYRVRELAFEHMNNAEYVEVEPLQKTGHRIQEELFYPSN
EEKMRLLQTLVEEEWPDRCIIFANTKHRCEDIWGHLAADGHRVGLLTGDVSQKRRLRILE
EFTQGALDILVATDVAARGLHIPSVTHVFNYDLPDDCEDYVHRIGRTGRAGESGCSISLA
CEEYALNLTAIESYIGHQIPVSKYNSDALLTDLPAPKRLTRPRNGSGPRRSGGPRRSGAP
RHNRKRPG
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacacacttaacagaaaagaagttttccgacttcgccctgcacccgttaatc
gttgaagcgcttgattctaaaggctttaacaattgtacgcccattcaagcgctgactttg
cccattacgcttgcgggcaaagacgtcgcgggccaggcgcaaaccggtaccggcaaaacg
ctggcctttctaacggccacgtttcatcatttactcacccaccctgccgccgaggggcgt
caaaccaatcagccgcgcgcgttgattatggcgcctacccgcgagctggcggtgcaaatc
cattccgatgccgaaccattagcccaggcgaccggcctgaaaatggggctggcctacggc
ggcgatggttatgataaacagctgaaagtgctggaagccggggtcgacatcctggtgggc
accaccggcaggctgattgactacaccaaacagaattacgtcaatatgggcgccattcag
gtggtggtgctggacgaggccgatcgaatgttcgacctcggctttatcaaagatatccgc
tggctgttccgccggatgcccgccgccgctgaacggctgaacatgctgttttccgccacc
ctctcttatcgggtgcgcgagctggcgttcgagcatatgaataacgccgagtatgttgaa
gtggagccgctgcagaaaacgggccaccgcatacaagaggagctgttttatccttctaat
gaagaaaaaatgcgcctgctgcaaaccttggtcgaggaagagtggcccgaccggtgtatc
attttcgccaataccaagcaccgctgtgaggatatctggggccacctggccgctgacggt
catcgcgtcgggctgctgaccggcgatgtctcgcagaagcggcgcctgcgcatcttagaa
gagtttacccagggcgcgctggatatcctggtggcgacggacgtggccgcccgcggactg
catattccctccgtgacccacgttttcaattatgatctgccggacgactgcgaagattac
gtccaccgtatcggccggaccggccgtgccggcgagagcgggtgttccatcagcctggcg
tgtgaagaatatgcattgaatcttaccgcgatagaaagctatattggccatcagatcccc
gttagtaaatacaacagcgacgcactgctgaccgacctgcccgcgccaaaacggttgacc
cgcccccgcaacggcagtggtccccgccgcagcggcggcccgcggcgcagcggcgcgccg
cgccataaccgtaaacgtccgggctaa
DBGET
integrated database retrieval system
