Sodalis praecaptivus: Sant_0334
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Entry
Sant_0334 CDS
T03004
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sod
Sodalis praecaptivus
Pathway
sod03420
Nucleotide excision repair
sod03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Sant_0334 (uvrD)
03430 Mismatch repair
Sant_0334 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sod03400
]
Sant_0334 (uvrD)
Enzymes [BR:
sod01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Sant_0334 (uvrD)
DNA repair and recombination proteins [BR:
sod03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Sant_0334 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
Sant_0334 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AHF75440
UniProt:
W0HTB7
LinkDB
All DBs
Position
374164..376326
Genome browser
AA seq
720 aa
AA seq
DB search
MDVSDLLNSLNDKQREAVAAPRGNLLVLAGAGSGKTRVLVHRIAWLLSVENCSPYSVMAV
TFTNKAAAEMRHRIEHLVGTSQGGMWIGTFHGLAHRLLRAHHQDANLPQDFQILDSEDQL
RLLKRLIRAMNLDEKQWPPRQAMWYIGGKKDEGLRPQHVESYGNPVEATWQRIYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILRHYRERFTNILVDEFQDTNQIQYAWIRMLAGND
GNVMIVGDDDQSIYGWRGAQVENIQRFLDDFPGAQTIRLEQNYRSTSNILQAANALIAHN
GGRLGKNLWTEGAEGEPITLYCAFNELDEARFVVNRIKVSQEQGGALKDCAILYRSNAQS
RVLEEALLQTGLPYRIYGGMRFFERQEIKDALAYLRLIANRNDDAAYERVVNTPTRGLGD
RTLDVVRQTARDRQLTLWQSSRALLAERVLAGRAAAALQRFLELVDALAQETAELPLHVQ
TDRVIKNSGLWSMYEQEKGEKGQARIENLEELVTATRQFSYNDEDQDLLPLQAFLSHAAL
EAGEGQADAYQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMDKLTITYAETRRLYGKEAYHRPSRFVGELPPSCVEEVRLRASVTRPASQQRLG
APLSENDSGFTLGQRVRHPKFGEGTVVNLEGSGEHSRLQIAFQGQGIKWLVAAYARLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttctgatttgctcaacagcttgaacgacaagcaacgggaagccgtggcggcg
ccacgcggtaatttactggtgctggccggcgccggcagcggcaaaacccgggtgctggtg
caccgtatcgcctggttgttgtcggttgaaaactgctcgccctattcggtgatggccgtg
accttcaccaacaaagcggcggcggaaatgcgccaccgtatcgaacatttggtgggcacc
agccagggcggcatgtggataggcaccttccatgggctggcccaccgcctgctgcgcgcc
catcatcaagatgccaatctgccgcaggattttcagatcctcgacagcgaggatcagctg
cgtttgttgaaacgcctcatccgcgccatgaatcttgatgagaaacagtggccgccgcgc
caagcgatgtggtatatcggcggcaagaaagatgagggtttgcgcccgcaacatgtggaa
agttacggcaatccggtggaggcgacctggcagcgtatttatcaggcctatcaggaagcc
tgcgaccgcgccgggctggtggatttcgccgagctgctgctgcgcgcccatgagctgtgg
ctgaacaagccgcatattctgcgccattaccgcgagcggttcaccaacatcctggtagac
gaatttcaggataccaaccaaatccaatacgcctggatccgcatgctggccggcaatgac
ggcaatgtgatgattgtgggtgacgatgaccaatcgatttacggctggcgcggcgcgcag
gtagaaaatatccagcgttttctggatgattttcccggcgcgcagaccattcgccttgag
cagaattaccgttccaccagcaatatcctacaggccgccaatgcccttatcgcccacaac
ggcggccggctgggcaaaaatctgtggaccgaaggcgccgagggcgagccgattaccctt
tactgcgcctttaacgaattggacgaggcgcgcttcgtggtgaatcgcatcaaggtgagc
caggagcagggcggggcgctcaaggactgcgccattctctatcgcagcaacgcccagtcg
cgcgtgctggaagaagcgctgctgcaaacgggcctaccctaccgaatttatggcggcatg
cgctttttcgagcgtcaggaaatcaaggatgcgctcgcctatttacggcttatcgccaac
cgcaacgatgacgccgcctatgagcgggtggtcaatacgccgacgcgcggactcggcgat
cgcaccctcgacgtggtgcgccagaccgcccgcgaccggcagttgacgctgtggcagtcc
agccgggcgctgctcgccgagcgcgtgctggccggccgcgccgccgccgcgctgcaacgg
tttttggagcttgttgatgcgctggcgcaagagacggcggagctgccgctccatgtgcaa
accgatcgggtgatcaaaaattccggtctgtggagcatgtacgagcaggagaaaggcgaa
aagggccaggcgcgtatcgaaaacctggaagagctggtcaccgccacccgccagttcagc
tacaacgatgaagatcaggatctgctgccgttgcaggcgttcctatcccatgccgccctg
gaggccggcgagggccaggctgatgcctatcaggatgcggtgcaattgatgacgctgcat
tccgccaaagggctggagtttccccaagtgtttatcgtcggcatggaagaggggatgttc
cccagccaaatgtcgctggacgagggcgggcggctggaggaggagcgacgtttggcgtac
gttggcgttacccgcgcgatggacaagctgaccatcacctatgcggagacccgccggctg
tacggcaaagaggcctaccatcggccgtcgcgttttgtaggcgaactaccgccgtcctgc
gtggaagaggtgcggctgcgcgcaagcgtgacccgtccggccagccaacagcgcctaggc
gcgccgctgagcgaaaacgacagcggtttcaccctcggccagcgagtgcgtcatccgaaa
tttggcgagggcacggtggtgaatctggaaggcagcggcgaacatagccggctgcaaatc
gcgtttcaaggccagggtattaaatggctggtggcggcttacgcccggctggaaaccgtt
taa
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