Sodalis praecaptivus: Sant_0939
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Entry
Sant_0939 CDS
T03004
Name
(GenBank) TRNA/rRNA methyltransferase
KO
K03214
RNA methyltransferase, TrmH family [EC:2.1.1.-]
Organism
sod
Sodalis praecaptivus
Brite
KEGG Orthology (KO) [BR:
sod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sod03009
]
Sant_0939
03016 Transfer RNA biogenesis [BR:
sod03016
]
Sant_0939
Ribosome biogenesis [BR:
sod03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Sant_0939
Transfer RNA biogenesis [BR:
sod03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
Sant_0939
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SpoU_methylase
SpoU_sub_bind
2-ph_phosp
Motif
Other DBs
NCBI-ProteinID:
AHF76014
UniProt:
W0HQF0
LinkDB
All DBs
Position
1047359..1048492
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AA seq
377 aa
AA seq
DB search
MSDSDALKGKNGKVRVMYVRKEEEQAPARRPATRSSTTDRKSGQRDEGRNPWKTPGDRAR
GGARADRASSSGDAPRRARQDAPPRDDSAGRRPRGETSDSPWKTFYAGDDAAVPDHGGIS
GKSQIDPEQLRRQRAEETRVYGENACQALFRNRPDAIVRAWFEQSVTPRFRDALRWMAAN
RKAYHVVEDDELAKASGTEHHGGVCFLIKKRAGLDADGYLTSVAAKQHDCVMALEQISNP
HNLGAILRSCAHFGVNGVMVGDSALLESGAAVRTAEGGAEHVKAIQCDDMLQDMQRFQRA
GYTVVTLTGNGGTPLSEVKMPARAVLVLAEEGGALSQAVLSQADIAVAINGTGRVPSLNV
SVSAGILLAEWWRQNRG
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatagcgatgcgttaaagggtaagaatggcaaagtccgcgtgatgtatgtgcgc
aaggaggaagagcaggcgccagcgcgccgccccgccacgcgcagctccaccaccgatcgc
aagagcggtcagcgcgatgagggccgtaatccgtggaagacgcccggcgaccgcgcccgc
ggcggcgcacgtgccgatcgcgcctcctcctcgggcgacgcgccccgccgcgcccggcag
gacgccccaccccgcgacgacagcgccggccgccggccgcgcggcgaaacctcggactcg
ccgtggaaaaccttctacgcgggggatgacgccgctgtacccgatcatgggggcattagc
ggcaaaagccagattgatcccgaacagctgcgccgccagcgcgccgaagaaacccgcgtt
tacggggaaaacgcctgtcaggcgctgtttcgcaaccgcccggacgccatcgttcgagcc
tggtttgagcaatcggtgacgccgcggtttcgcgatgcgctgcgctggatggcggccaac
cgcaaggcttatcatgtggtggaagacgatgagctggccaaagcctcgggcacggagcat
cacggcggcgtctgttttctgattaaaaaacgtgccggtcttgacgccgacggttatctg
accagcgttgctgcaaaacagcacgattgcgttatggcgcttgagcagattagcaatcct
cacaatctcggcgcaatcctgcgcagttgtgcgcacttcggcgtaaatggcgtgatggtg
ggcgatagtgccctactggagtccggcgccgcggtgcgcaccgcggaaggtggggcagag
cacgtcaaagccattcagtgcgacgatatgttgcaagacatgcagcgttttcagcgtgcc
ggctacaccgtggtgacgctgaccggcaacggcggcacgccactttccgaagtgaagatg
cccgcccgggcggtgctggtattggcggaagagggcggcgcgctctcacaagcggtactg
tcgcaggcggatatcgcggtggccatcaacggcaccggtcgggtacccagtttgaacgtg
tccgtcagcgccggcattttgttggcggagtggtggcggcaaaaccgcggctga
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