Sodalis praecaptivus: Sant_1218
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Entry
Sant_1218 CDS
T03004
Symbol
dapE
Name
(GenBank) Succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
sod
Sodalis praecaptivus
Pathway
sod00300
Lysine biosynthesis
sod01100
Metabolic pathways
sod01120
Microbial metabolism in diverse environments
sod01230
Biosynthesis of amino acids
Module
sod_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sod00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Sant_1218 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sod01002
]
Sant_1218 (dapE)
Enzymes [BR:
sod01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
Sant_1218 (dapE)
Peptidases and inhibitors [BR:
sod01002
]
Metallo peptidases
Family M20
Sant_1218 (dapE)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Peptidase_M18
Motif
Other DBs
NCBI-ProteinID:
AHF76287
UniProt:
W0HUS6
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All DBs
Position
complement(1366243..1367370)
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AA seq
375 aa
AA seq
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MSCPVLELAQQLIKRPSLSPDDAGCQAIIAARLRALGFTIEPMPFGDTLNIWAWRGEGPT
LAFAGHTDVVPTGETQHWDNPPFEPTLRDGLLYGRGAADMKGSLAAMVVAAERFVAQHPH
HQGRLAFLITSDEEADARDGTVKVVEALMARQERLDYCLVGEPSSSRQVGDIIKNGRRGS
LTANMVVEGVQGHVAYPHLAENPVHRAMGALKELVATRWDEGNEFFPPTTMQIANIHAGT
GSNNVIPGELQVQFNFRFSTELSDATLRQRVEALMQQHGLRYRIDWSLSGQPFLTARGEL
VDAAVRAVEHYQELTPRLETTGGTSDGRFIARMGAQVVELGPVNATIHKVNECVSAADLQ
LLSRMYQRIMEQLVL
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgtcccgtattggaactcgcgcagcaattaatcaaacgcccctccttaagccct
gatgacgccggctgccaggcgatcatagcggcgcgcctgcgggcgctgggtttcaccatc
gaaccgatgccgttcggcgacacccttaacatctgggcctggcgcggcgagggccccacc
ctggccttcgccggccataccgatgtggtgccgaccggcgagacacaacattgggataac
ccgccgttcgagccgacgttacgtgatggcctgctctacggccgcggcgcggcggatatg
aaagggtcgctggccgccatggtggtggccgccgaacggtttgtcgctcaacatccgcat
catcagggccggctggcgtttctgatcacctccgatgaggaagccgacgcgcgcgacggc
acggtcaaagtggtggaagcgttgatggcccgtcaggaacggctggactattgcctggtg
ggtgagccatccagcagccgtcaggtcggtgatatcatcaaaaacggccggcgcggctcg
ctcaccgccaatatggtggtggagggcgtacagggtcatgtcgcctatccgcatctggcg
gagaaccccgtgcatcgcgcgatgggcgcgctgaaggaactggtggcaacccggtgggac
gagggcaatgaatttttcccgcccacgacgatgcaaatcgccaatattcatgccggaacc
ggcagcaacaatgtcattcccggcgagctacaggtgcaattcaactttcgtttcagtacc
gagctctctgacgccacccttcgtcagcgggtagaagcattgatgcagcaacatgggctg
cgctatcgcattgactggtcgctatccggccagccgttcctgaccgcgcgcggcgagctg
gtggacgcagcggtgcgcgcggtggagcactatcaggagttaacgccgcgcctggaaacc
accggcggcacctccgatggccggttcatcgcccgcatgggcgcgcaggtggtggagctc
ggcccggtcaacgccaccatccataaagtcaacgagtgcgtaagcgccgccgatttacag
ctgctgagccggatgtaccagcgcatcatggaacaattggttctatga
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