Sodalis praecaptivus: Sant_2841
Help
Entry
Sant_2841 CDS
T03004
Name
(GenBank) Putative nematicidal protein 2
Organism
sod
Sodalis praecaptivus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
TEN_YD-shell
Motif
Other DBs
NCBI-ProteinID:
AHF77856
UniProt:
W0HVH3
LinkDB
All DBs
Position
3280476..3285923
Genome browser
AA seq
1815 aa
AA seq
DB search
MNTFTSPCIDPRTGLIRFQLPLLHLIGNDHMGPALSLMLDYLPLETQPSLYGQGFRDTLS
WFNPQTRQLQTDGGARFGLTRRDGEWAFLSPCPQHIKLATRQDSLWIYYRNGAIEIVSRS
PQQPADDVLWRLQTRLSAGGNALTLSWGWRQHLALLISVADDDGELLRTSLRLLPPAGEK
ARARMDVEGGSPAQAELIADIEATARSAAKAEADAPAQAGLIADIEATARSAAKTEADAP
AQAGLIADIEANARSARNPASEAFVQANASARAGAKADAKSNTASAINAELVFTCFPASQ
APVTTLLTVAGGRLIQLSRGSAGERILCRIAYHPTLGVIQQVNLSGGVCESFGYAEDAVF
PLVNGHTTTVSDGDKRLYCLTETFSISHSDAVAPHPTRHHHPDGAAEAPTPYQSVMTRIL
PMPAENVLHSDDGAPEIQTIIHRYNRLHLLVAKEEIRETQVCGQRRRGRTSTQWAYNCDD
ALALADQSAHYALAREKRVTWDENGPAPRYLPRYRCEISRYEYDNGGNLIQHVYPDGSSE
RITYYSPAGEEHCPAEPQGFIRFIKSVTHCRRGGDPATGRTVFYRYRGFPGRSGSPLAGR
QMILCIAEEVPGRLLQRFDYHMQPDGGNNEHGRLIKKTYTHYPENTPNTFSETYRWSKMI
PAGQNDADAQLQRETQLRHLDDAAPLTTTRVWRHAGYALLSFTDAYGNTTRYHYAPEGYL
EKTEHHADTPYASVSHRWLEENFRQNGLITLTRTDIQGNRIISHIDGFGRLHRRYYQCRQ
HPLNRLPIEQREYDPLGRLSRLTTYDHSDEEGPIRPLVTRYNDCAWDHWGHRYASVDHDG
QQGVCHYHHLDIIKQKSSKQTRSDYRSGRHGNAAPHYSGIFYERYRHGKPLRQLRLLPQP
DGKASVIISELRLNYDDQCRLSAVNERGTGQAIRWRYNDDDRVAQQTLQDGSLLHYRYRS
PDDSPSFIAISAGPTAPQQTLYRCETDRWGRMTASREGEAPTATQVYYAALSPLPTAVQH
ADGTITRFDFHPKHNALIRQSWEGGHREFHYDNTTGYLIGCTEYRTDASPSGAVVSRVAL
RYNSQGQRVQEMIFSARDQLLYEVYYRYSLAGRLLSVRDSEDTHIRYRYDAAGRLSSVRD
NYMEVHFDYDHLERMTRRQVRLPGQENVTTRWLFDAFNRPVNILVTSQTGAETPVELIIS
QQFNGLDQIVKRTLQERRGGKTLRRYESFDYSARGCLTACRYAGELPLLAAVGEQFEQVI
AETFTWDALNNLTEATVHYAQPTQTGCPAEQTTRYGYHHPDCPTRRTSIQYGGADARTVQ
LAYDLQGRLIDDGHRRRYRYDPLGRLQAVSGDGLPATCYCYDAFNRLQGQSGEDATSLHF
YHGRRLAHIKHHCPTRPAQEIDRVSYVHAAGLAAVKTRSALGTDILLTATDSRGSLLRYG
RQPTQHYLAWGTPAAATSSFDAACASPLARYLPLWQGELYDTASGGYLLGSGYRLYRPDL
QGFTTQDNLRVGGLTGINRYLYGRGDPINRFDPDGRLSWNAWVNYAYGAGATLMAPAVFL
AAGPAGLATALTLSATQLTSGILAIAAGMLDRQHPHVAGVLSLCSLGVALAASGIGEAIA
AREAMAIESAGFAPRPIYHLNKSEMGLYTNYANRHILAFQTHGSPTGALLQNPEGQMVSA
ATVAYEYIQPLLDVAMKTEQQVFSPNEPLLLLACYGARSGAAHEVANALGRPVAAYDNLL
FTVKSVFAEGFAGGDIMPRYRVAHNPLRRLWLHVSGQPMFHSASYHMVYPDGFDAMAQGA
MTSISNFERHYYGIG
NT seq
5448 nt
NT seq
+upstream
nt +downstream
nt
atgaatacatttacttcaccgtgcattgacccgcgcaccggtttgattcgctttcagtta
ccgctgctgcacctcatcggcaatgaccacatgggtccggcgctcagcctgatgctggac
tatctcccgctggaaacgcagcctagcctgtacggtcagggtttccgcgatactttgtca
tggttcaatccgcagacccggcagttgcaaaccgacggcggcgcgcgtttcgggcttact
cgacgagacggggaatgggctttcctttctccgtgcccgcagcacatcaagttggctacg
cgccaagacagcctgtggatttattatcgcaacggcgcaatcgaaatcgtctcccgttcg
ccgcagcaacccgccgacgatgtactgtggcgactgcaaacgcggctctctgcgggagga
aacgccctaacgctcagttggggatggcggcagcatctggcgctgttgatttccgttgcc
gatgacgacggcgaattgctgcgcacgtcgctgcggttattgccacccgccggggaaaag
gcgcgtgccaggatggatgttgaaggcggatcccctgcgcaggccgaattgattgctgac
atcgaagccaccgcgcgtagtgcggcaaaagcggaagccgacgccccagcgcaggccggg
ttgattgctgacatcgaggccaccgcgcgaagtgcggcaaagacggaagccgacgcccca
gcgcaggctgggttgattgctgacatcgaggccaacgcccggagcgcgcgaaacccggcg
tcagaagcctttgtacaggcaaacgccagcgcccgggcaggggccaaggccgatgcaaag
agcaacacggcgtctgcgataaacgcagagctggtttttacctgctttcccgcatcgcaa
gcccccgtcaccaccctgttgaccgtcgccggaggccgactgattcagctatccagggga
tccgcgggggaacggattttatgccgtatcgcctatcaccccaccttgggggtaatacaa
caggttaacttgtccggcggcgtgtgcgaatcgtttggctacgcagaagatgcggtgttc
ccccttgtcaacggccataccaccaccgtcagcgacggcgataagcgcctgtattgcctg
accgaaaccttcagcatcagccacagcgatgcggttgctccgcatccgacccgtcaccat
catcctgacggcgccgcggaagccccgaccccttatcagtcggtgatgacccgtatcctg
cccatgccggcggaaaacgttctccattccgacgacggcgcacctgagatccagacgatt
atccaccgctacaatcgcttgcatttactggtggcgaaagaggagatccgcgaaacgcag
gtctgtggacaacggcggcgaggacgaaccagcacgcaatgggcttataactgtgacgat
gcgctggcgctggccgatcaaagcgcgcactacgcgctggcgcgagaaaaacgggtcacc
tgggatgaaaacgggccggcgccccgatatctgccccgctatcgctgcgaaatatcccgc
tatgaatatgataatgggggcaacctcatccagcatgtttatcccgacggcagcagcgaa
cgcatcacctactactcgccggcaggggaggaacactgccctgccgagcctcagggcttt
atccgcttcatcaaaagcgtaacccattgccgtagagggggggatccggccacgggcaga
accgtcttctatcgctaccgcggcttccccggccggagcggctcgccgctggcggggcgg
caaatgatcctctgcatcgctgaagaagtaccgggccggctgctacagcgctttgattat
cacatgcagcccgacggcggcaataatgaacacggccgcttgataaaaaaaacctatacc
cactacccggagaataccccgaacacgtttagcgaaacctaccgctggagcaaaatgatt
cccgcaggccaaaacgacgccgatgcgcagctacagcgggaaacgcagttgcgccatctg
gacgatgccgcgccgctcaccaccactcgggtatggcgtcatgccggctatgcgttgctg
tcatttaccgatgcctacggcaatacgacccgctatcactatgccccggagggatatcta
gagaaaacggaacaccatgccgataccccctacgcctcggtcagccaccgttggctggag
gagaacttccgccagaacgggttaattactctgacccgtaccgatattcagggcaaccgt
atcatcagccatattgacggtttcggtcggctgcaccgccgctattatcaatgtcgtcag
catcccttgaatcggctaccgatcgagcaacgcgagtatgatccgctgggacggctttcc
cgcctcacaacctacgaccacagcgatgaggaaggccccattcgcccgcttgtcacccgc
tacaacgattgcgcctgggatcactggggtcaccgttatgcaagcgtcgatcacgacggc
cagcagggcgtttgccattaccatcatctggacattattaaacagaaaagcagcaaacaa
acgcgcagcgactaccgcagcggccgccatggcaatgctgcgccgcactattcgggtatc
ttctacgaacgttaccggcacggtaagccattgcggcaattgcgtctgctgccgcagcct
gacggcaaagcctccgtcattatcagtgaactgcgtctgaattatgacgatcaatgccgt
ttgagcgcggtgaacgaacgggggacaggccaggccatccgttggcgctataatgatgac
gatcgggtagcgcagcagacgctgcaggacggcagtctgctgcattatcgttaccgctcg
ccggacgacagtccgtcctttatcgccatcagcgcgggacccacggcgcctcagcaaacg
ctataccgctgcgagaccgatcgctgggggcggatgacggcatcgcgcgagggggaagcg
ccgacggcgacccaggtctattatgccgccctgagcccgctacccacggcagtccaacat
gccgatggcacgatcacgcggttcgattttcatcccaagcataacgctttgatccggcaa
agttgggagggaggccaccgcgagttccattacgataacaccaccgggtatcttattggc
tgcaccgaataccgtaccgacgcctccccctccggcgccgtcgtgagccgcgtcgccctg
cgctacaattcacagggtcagcgggtgcaggagatgattttcagcgcgcgggatcaactg
ctgtatgaggtctattaccggtacagcctcgcgggaaggctcctcagcgtgcgcgatagc
gaagatacgcatatacgctatcgctatgacgccgccggtcgcttgagttccgtacgcgac
aattatatggaagtccattttgattacgatcatctcgagcgcatgacgcgccggcaggta
agactgcccggtcaggaaaacgtgactacccggtggctgtttgatgctttcaaccgcccg
gtcaatatcttggtcaccagccaaacgggcgcggaaacgccggtggaactcatcattagc
cagcagtttaatggcctggatcagatcgtcaaacgtacgctgcaagaacgcaggggcgga
aagacgttacggcgctacgaaagttttgactatagcgcgcgcggctgccttaccgcctgc
cgctacgccggcgagttgccgctgctggcggcggtgggcgagcaatttgagcaggtgatc
gccgaaacgttcacctgggatgcgctaaacaaccttaccgaggcgacggtacactatgca
caacccacacaaaccggctgtcccgccgaacaaacgacccgctatggctaccaccacccc
gactgccccactcgccgcaccagcatccagtacggcggcgccgacgcccgcaccgtccaa
ttggcctatgatctgcaaggccgcctgatagatgacggtcatcggcggcgctatcgttac
gatcccctagggcgattgcaagcggtctccggcgacggccttcccgcgacatgttattgc
tacgacgcattcaatcgattgcaaggacagagcggcgaagacgcaacctccctgcacttt
tatcacggccgccgcttggcgcatatcaaacaccattgtcccaccaggccggcgcaggag
attgaccgggtcagctatgtccacgccgccggtctggcggcggtgaaaacccgctccgcg
ctcggaacggatattttactcaccgcgacggatagccgcggcagtctcctgcgctacggc
cgccaacccacccagcattacctcgcctggggcacccctgctgcggcgacgtcttcgttt
gatgccgcttgcgccagtccattggcgcgctatctgccgctgtggcaaggggaattgtac
gatacggcgagcggcggctaccttctcggcagcggctaccggctttatcgtcccgatctc
cagggcttcaccacccaggataacctgcgggtgggcggtctgacggggattaaccgctat
ctttacggtcgcggcgaccctatcaatcgcttcgatcccgatggccgcttgagttggaat
gcctgggtaaattacgcctatggcgcgggcgccacgctgatggcaccggcggttttcctg
gccgccggtccggcgggtttagcgaccgcgctcacgttatccgccacccaattgaccagc
ggcatcctcgctatcgccgcgggcatgctggatcgacagcatccgcacgtggccggcgtg
ttgtcactgtgttcattgggtgtcgcgctggccgccagcggtattggcgaggcgatcgcg
gccagagaggccatggcgatagaaagcgccggctttgcgccgcggccaatttaccatctc
aacaaatcggagatggggctgtataccaattacgccaaccgtcacatcctggcgtttcaa
actcacggctcgccgacaggcgcgctgttgcaaaaccctgaagggcagatggtttccgcc
gcgacggtcgcctatgagtatattcagccgctgctggacgttgccatgaagaccgagcag
caggtgttttcccccaatgaaccgttgctgctgctggcctgctatggcgcgcgcagcggc
gcggcgcacgaggtggccaatgccctgggccggccggtggcggcctatgataatttgctc
ttcacggtaaagtcggtttttgccgaaggcttcgccggcggcgatattatgccgcgctat
cgagttgcccataatccgctgcggcgtttgtggctgcacgtcagcggacagccgatgttc
cactctgccagctatcacatggtttatccagacggctttgacgcaatggcccagggagca
atgacctccatcagcaactttgaacgtcattactatggaatcggctaa
DBGET
integrated database retrieval system
