Sodalis praecaptivus: Sant_3016
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Entry
Sant_3016 CDS
T03004
Symbol
ispA
Name
(GenBank) Polyprenyl synthetase
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
sod
Sodalis praecaptivus
Pathway
sod00900
Terpenoid backbone biosynthesis
sod01100
Metabolic pathways
sod01110
Biosynthesis of secondary metabolites
Module
sod_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
sod00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Sant_3016 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
sod01006
]
Sant_3016 (ispA)
Enzymes [BR:
sod01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
Sant_3016 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
Sant_3016 (ispA)
Prenyltransferases [BR:
sod01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
Sant_3016 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
DUF1776
Motif
Other DBs
NCBI-ProteinID:
AHF78022
UniProt:
W0HZU1
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All DBs
Position
3450045..3450947
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AA seq
300 aa
AA seq
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MTDFARALEDSRQQVDAALEHYLHTLTSQQTPLVQAMRHGALLGGKRLRPFLVYQTGRLF
GLTPASLDAPASAIECIHAYSLIHDDLPAMDNDALRRGLPTCHVKFGETTAILAGDALQT
LAFSILADAEMPEVSAQDRLQMISTLAAASGADGMCLGQALDLAAEGQQVSAARLETIHR
HKTGALIRAAVRMGALAAGERGSPALGYLDRFAAAIGLAFQVQDDILDVVGDSQTTGKRQ
GADQELGKSTYPALLGLDMARAKAQDLYHESLASLECVAALGYDTATLVALARYIIERDK
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatttcgcccgcgcgttagaagatagccgccagcaggtggatgcggcgttggaa
cactatctgcacaccctgaccagccagcagacgccgctggtccaggccatgcgccacggc
gctctgctggggggcaaacggctgcggccctttttggtttatcagaccggccggctattc
ggactcacgcccgcaagccttgatgcgccggcgagcgcgattgagtgtatccatgcctat
tcgctgattcatgacgatctgccggcgatggataacgacgcgctgcgccgcggcttgccg
acctgccacgtcaaatttggtgaaactaccgccattctggccggcgatgcgctgcaaacg
ctggctttcagcatcctggccgatgcggaaatgcctgaggtcagcgcacaggataggctg
caaatgatctcgaccctggctgccgccagcggcgccgacggcatgtgcctcgggcaggcg
ctcgatttggcggcggagggtcagcaggtatccgccgcgcgtctggagacgattcaccgg
cacaagaccggcgcccttatccgcgccgcggtgcggatgggcgcgctggcggccggcgaa
cgcggcagcccggcgctgggctatctcgatcgtttcgctgccgccatcggcctggctttc
caggtacaagacgatattcttgatgtcgtgggcgacagtcaaaccaccggcaagcggcag
ggagcggaccaggaattaggcaaaagtacctatccggccctgctgggactggacatggcg
cgggccaaggctcaggatctgtatcacgaatcgctagcatccttagaatgtgtcgccgca
ctcggttatgataccgccacgctggtggcgctggcgcgctatattattgaacgtgacaaa
taa
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