Sodalis praecaptivus: Sant_3042
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Entry
Sant_3042 CDS
T03004
Symbol
sbcD
Name
(GenBank) Exonuclease
KO
K03547
DNA repair protein SbcD/Mre11
Organism
sod
Sodalis praecaptivus
Brite
KEGG Orthology (KO) [BR:
sod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sod03400
]
Sant_3042 (sbcD)
DNA repair and recombination proteins [BR:
sod03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Sant_3042 (sbcD)
Archaeal homologous recombinant proteins
Sant_3042 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AHF78048
UniProt:
W0I0T7
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All DBs
Position
3477309..3478535
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AA seq
408 aa
AA seq
DB search
MRIIHTSDWHLGQSFFTKNRADEHQAFLTWLISQVDEHQVDALIVAGDVFDTGTPPSYAR
ELFNRFVVSLQPTGCRLVALAGNHDAVATLNESRALLACLNTRIVAGGNGEDQVWVLDDR
HGAPGAVLCAVPFLRPRDILVSRGGLSGGEKQQALLDAIAERYQQLYLRAQRLRDALPSP
VPIIATGHLTTVGASTTDSVRDIYIGALDAFPARLFPPADYIALGHIHRPQIIGGNDCIR
YCGSPIPLSFDEAGQPKQVNLVTFQDGLPPRITPLTVPETQPMRLIKGPVDEIERQLRGY
ADYRGERPVWLDIEVVADGYLTDIQQHLQALAEPLPVEVVLLRRSREQRSSGLHPLQQET
LSELSVSEVFERRLALEEAPDEPRCQRIRGLFEQVVGDVHDGREGAEA
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattattcacacttctgattggcatctgggtcagtcgttcttcaccaaaaaccgc
gccgacgaacatcaggcgtttctgacgtggcttatcagtcaggtggatgaacaccaggtg
gacgccttgattgtagcgggcgatgtcttcgataccggtacaccgcccagttatgcccgc
gaattattcaaccgtttcgtcgtgtcgctgcagccgaccggctgtcgcctggtggcgctg
gcgggcaatcatgacgcggtcgcaacgctcaatgaatctcgcgcgctgctggcgtgcctg
aatacgcgcattgtggccggcggcaacggcgaggaccaggtgtgggtgctagacgatcgc
cacggcgcgccgggcgcggtgctgtgcgccgttccctttctgcggccgcgggatatactg
gtcagccgcggcggcctgtcgggcggtgaaaagcagcaggcgctgcttgacgccatcgcc
gagcgctatcagcagctgtatctacgcgcgcagcggttgcgcgacgcgctcccctccccg
gtcccgattatcgccaccggccatctcacgacggtcggcgccagcaccaccgattcggtg
cgcgatatttacatcggcgctctcgatgcttttcccgcgcggttgttcccgcccgcggat
tatatcgccctgggccatattcaccggccgcagattatcggcggcaatgactgcatccgc
tattgcggctcgccgataccgctaagttttgatgaggcgggccagccgaaacaggtcaat
ctggttactttccaggacggtctgccgccgcggataacgccgctgacggtgcccgaaacg
cagccaatgcggcttatcaaaggccctgtggatgagatagagcggcagctgcgcggctat
gctgattatcgcggcgaacgcccggtgtggctggacattgaggttgtggccgacggctat
ctcaccgacatccagcagcatctccaggcgttggcggagccgttaccggtagaggtggtg
ttgctgcgccgcagccgcgagcagcggtctagcggccttcatccgttacagcaggagacg
cttagcgaattgagcgtgagcgaggtgtttgaacggcggctggcgctggaggaggcgccg
gatgaaccccgctgccagcgcatccggggcctgtttgaacaggtggtcggcgatgtacac
gatggccgggagggagcggaagcatga
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