Sodalis praecaptivus: Sant_3043
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Entry
Sant_3043 CDS
T03004
Symbol
sbcC
Name
(GenBank) SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
sod
Sodalis praecaptivus
Brite
KEGG Orthology (KO) [BR:
sod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sod03400
]
Sant_3043 (sbcC)
DNA repair and recombination proteins [BR:
sod03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Sant_3043 (sbcC)
Archaeal homologous recombinant proteins
Sant_3043 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
ABC_tran
AAA_15
cobW
nSTAND3
NTPase_1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AHF78049
UniProt:
W0HWA2
LinkDB
All DBs
Position
3478532..3482278
Genome browser
AA seq
1248 aa
AA seq
DB search
MKILTLRLKNLNALQGEWKIDFTAAPFDRSSLFAITGPTGAGKTTLLDAISLALYHQTPR
LKDNPGPELMTRHTAEALAEVEFAVKGVGYRAFWSQRRAKNQPDGNLQGVKVELARISDG
LILADKISDKKRLIAELTGLDFARFTKSILLAQGDFAAFLNADAKSRAGLLEELTGTDIY
GRISADVFERNKAVRTELAQWEARAGAIEMLTGEQQAALEDELTQRRQEEQRLNAQRHVR
QRHQAWLNERTQRQTALAQTQQASLQAAQQVQAAAPDLARLAAAEPAEALRPLLDQQRRD
AQACTRAEGELAQLQQRQQQDQARLQPLAQALRLADEQLAAHEEDQRRHQQIIEEQLIPL
DQQIATLRQQQEDLKRQLVPLQQRHRQESAALATQQQALHQARQQAQEESDWLDRHAACR
LWGEQLPLWREQFARRDEALTHCRDLEQRVAQQRLRLTALQTEGQQRLTESQRLAQQREA
LSLSFAEAQRQREEQVHAQSGTTFETRWKRRQGQRPHYLLLTTLLPQLSGLADRLRQEES
QQSQRLQTRFMLSQEQTALHASLEDKTRLLRQTKTTLELERRIVRLEDERRALRAGEPCP
LCGATQHPAINAYQTLSPGRTEQQLQQQQTEVDQCAAAKIEGDTRLHLLVTQCQQGEETL
TALAHQRNELQQRWRQAVEQLAIAPDENLRLPELATLTPEALRAAADALAAYEREETQLA
QRLEQLQQATLAWQSARDALSAAELVHDRSLSALALNGQQQRDLEENLQASTLSLTQQQT
DLARLNEEIAAALDAAALTVPEPMQTAAWLDARRELWLRWQQRHEQAQRRLSQITSLNGS
VDALMQTVADLTQRQAALTQALTATDAELAGAGRQRHALAGDVTTVEFGARLRRTGERLR
QVQLQAGQQLQAAQRQLHELAGSLSALARQRQTLAQQASSSTSQLQQALSTSSFADSAAL
DAALLPTGERDALREHRDRLNAQQQRTDARQQQAAEALAQVEAARPPTLSPEEDDAAVAE
RLAELDDQLRQLARRQGEIQQQLGSHQQRQREQHLLLRQIEESRDRCQDWAYLNELIGSK
EGDKFRKFAQGLTLEHLIYLANQQLARLHGRYQLQRKTHEELELEVVDTWQADAIRDTRT
LSGGESFLVSLALALALSDLVSHKTGIDSLFLDEGFGTLDAQTLDIALDALDTLNASGKM
IGVISHVEAMKERIPVQIKVSKINGLGISRLQRQFAVADNAPVKEGDD
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctgacgctgcgcctcaaaaacctgaatgcgctgcagggtgaatggaaaatc
gactttaccgccgccccctttgatcgcagtagcttgttcgccatcaccggcccgaccggc
gcggggaaaaccacgctgctcgatgccatcagtctggcgctttatcaccagacgccgcgc
cttaaggacaaccctggcccggagctgatgacgcgccataccgcggaagcgcttgccgaa
gtggagttcgccgttaaaggggtcggttaccgtgcgttttggagccagcgccgggcgaaa
aatcaacctgacggtaatctgcagggagtgaaagtggagctggctcgcatcagcgacggc
ctgattttggcggataaaatcagcgataaaaaacgcctgatagccgaactgacggggctg
gattttgcgcggttcaccaaatccattttgctggcgcagggcgattttgccgcgtttttg
aatgctgacgccaaaagccgcgccgggctgctcgaggagctgacgggcaccgatatctat
ggccgcatctccgccgatgtgtttgaacgtaataaagcggtccgcaccgagctggcgcag
tgggaagctcgcgcgggcgccattgaaatgctgaccggtgagcagcaggcggcgctcgag
gacgaactgacgcagcggcggcaggaggaacagcggctgaacgcgcagcgccatgtacgt
cagcgtcatcaggcttggctgaatgaacggacgcagcggcagacggccctggcgcagacg
cagcaggcgtccttgcaggccgcgcagcaggtgcaggccgcagcgccggatctggctcgc
cttgccgcggcggagccggcggaggcgttgcgccctttgctggaccagcagcggcgcgac
gcgcaggcctgtacccgcgccgagggggagctggcccagttgcagcagcgccagcagcag
gatcaggcgcggctgcagccgctggcgcaagcgctgcggctcgccgatgagcaactggcc
gcgcacgaggaggatcagcgccggcatcagcaaataatagaggaacagcttatcccgctg
gatcagcagatcgccacgctgcggcaacaacaggaggacctcaagcgtcagcttgtgccg
ctgcaacagcgccatcgtcaggaaagcgcggctctggcgacacagcagcaggcgctgcat
caggctcgtcagcaggcgcaggaggagagtgactggctggaccgccatgccgcctgccgc
ctatggggtgagcagctcccgctgtggcgtgagcagttcgctcgccgcgatgaagcgcta
acccattgccgagacctggaacagcgcgtggcgcagcaacggttgcggcttaccgcttta
caaacggaaggtcagcagcgtttaacggagagtcagcggctggcacagcagcgcgaggcg
ctaagcttgagctttgccgaggcgcaacggcagcgggaagaacaggtccacgcgcagagc
ggcaccacgttcgagacgcgttggaaacggcggcaggggcagcggccccattatctgttg
ctgaccaccctgctgccgcagctctcggggctggcggataggctccggcaggaggagtcg
cagcagtcccaacgcctgcaaacgcggtttatgttaagccaggagcaaacggcgctgcac
gccagcctggaggacaaaacccggctgctgaggcagacgaaaaccacgctggagctggaa
cggcgtattgtccggctggaggatgagcgccgcgctctgcgcgccggtgaaccgtgcccg
ctgtgcggcgccacccagcatccagcgataaatgcctatcaaacgttgtcccccgggcgc
accgagcagcagttgcagcagcagcagaccgaggtagaccaatgcgccgcggcgaagatc
gagggggatacccgtttgcacctgctggttacgcagtgccaacagggcgaggagacgctg
acggccttggcgcatcagcgcaacgagctgcaacaacgctggcggcaggcggttgagcaa
ctggcgattgcgcctgacgaaaacctgcgccttcccgagctggcgacgctaacgcccgag
gctctgcgggcggccgcagacgcgctggcggcttatgaacgggaagagactcaactggcg
cagcggctcgaacagctacagcaggcgaccctggcgtggcagtcggcgcgcgatgcacta
agcgccgccgagcttgtccacgatcgcagcctgtcggcgctggcgctaaacggtcagcag
cagcgcgacctggaggagaatctgcaagcctccaccttgagtctgacccagcagcaaacc
gatctcgcgcggcttaacgaggagattgccgccgccctcgacgcggcagcgttaacggtg
ccggagccgatgcaaaccgcagcgtggctcgatgcccgccgggaactgtggctgaggtgg
cagcagcgccatgaacaggcgcagcggcgactaagccaaatcacctcgctgaacggcagc
gtcgacgccctgatgcagaccgtcgccgacctgacgcagcgccaggcggcgctgacgcag
gcgctaacggccaccgacgctgaactggccggcgccggccggcagcgtcatgccctggcc
ggcgatgtcacgaccgtcgagttcggcgcgcggctgcgccgcaccggtgaacggctgcgc
caggtgcagcttcaggccggccaacagctacaggcagcgcagcgtcagctacacgaactg
gcgggcagcctcagcgcgctggcgcgccagcggcagacgctggctcagcaggcatcgtcc
agcacaagtcagctgcaacaggcgttgagcacctcttcgtttgccgatagcgctgccctg
gatgctgcgctgctgcccacaggcgagcgggatgcgctgcgcgaacatcgcgatcggctt
aacgcgcagcagcagcgtactgacgcccgccagcagcaggccgccgaggcgctggcacag
gtggaggccgcccgtccgccaaccctgtcgcccgaggaggatgacgccgcggtggcggag
cgcctggccgaattggatgaccaactgcgccaacttgcccgcaggcaaggggaaatacag
cagcagttgggcagccatcaacagcgacagcgggaacagcatctgctgctgcggcagata
gaagagagccgcgaccgttgtcaggattgggcctatctcaatgagctcatcgggtcgaag
gagggggataaatttcgtaaattcgcacagggtttaacgttagaacaccttatttatctg
gctaaccagcagttggcgcgcctgcacggccgttatcagctgcaacgcaaaacgcacgaa
gagctggagctggaagtggtggacacctggcaggctgacgccatacgtgatactcggacg
ctgtcagggggggagagttttctggtcagcctggcgctggcgctggcgttatcggatttg
gtcagtcataagacgggcatcgactcgctgttccttgacgagggattcggcacccttgac
gcccagacgctggatattgccctggacgcgctggataccctcaacgccagcggtaaaatg
atcggcgtgataagccacgtggaagcgatgaaggagcgtatcccggtgcagataaaagtc
agtaagattaatggattgggcatcagccgcctgcagcgacaatttgctgtggcggacaat
gcgccggtcaaagagggagacgattga
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