Sodalis praecaptivus: Sant_3058
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Entry
Sant_3058 CDS
T03004
Name
(GenBank) Putative transcriptional repressor
KO
K22041
TetR/AcrR family transcriptional regulator, copper-responsive repressor
Organism
sod
Sodalis praecaptivus
Brite
KEGG Orthology (KO) [BR:
sod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sod03000
]
Sant_3058
Transcription factors [BR:
sod03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
Sant_3058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_N
TetR_C_13
DUF4503
Motif
Other DBs
NCBI-ProteinID:
AHF78064
UniProt:
W0HWB4
LinkDB
All DBs
Position
3498714..3499442
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AA seq
242 aa
AA seq
DB search
MSSKTAVTALRGRGRPKHFDADAALDVALRLFWQHGFEATSMHDLVAATGAKAPTLYHAF
GNKEGLFRAAMERYLQRFVRKMKPCLDNPHRSVAGATEDFLTACVAQFTGEGLPPGCFLI
CTSSALSADSQPIAALLRSHNMLPEQLLRDFYRERQIAGELPPSTDTVRLAKYLACQLQG
MAVQARDGVSRRQLCTLVALIMALWPQLARLPAASPAVAHGVDEMSLGADSSEGVDRRAY
RR
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcaaaacggccgttaccgccctacgcgggcgcggcaggccgaaacattttgat
gccgatgccgcactggacgtggccctgcgtttattctggcagcacggctttgaggcgaca
tcaatgcatgatctggtggccgccaccggtgctaaagcgccgaccctatatcatgctttc
ggtaataaagaggggctttttcgcgcggcgatggaacgttatctccagcgctttgttcgg
aaaatgaagccctgtctggataatccccaccgcagcgtcgccggcgctaccgaagacttt
cttacggcttgcgtcgcccaatttaccggcgaaggtttaccgccaggatgcttcctgatt
tgcacctcctccgccctgtcggccgattcccagcctatcgctgccctgctgcgtagccac
aatatgctgcccgaacaactgctgcgtgatttttaccgcgagcggcagatagcgggtgaa
ttgcccccgagtaccgataccgttcggttggccaaatatctggcttgccagttacagggg
atggcggtgcaagcgcgcgacggcgttagccgccggcagttgtgtacgcttgtggcatta
atcatggcgctttggccgcagctggcgcgattgccagcggcttcgcccgccgtggcgcac
ggcgtggatgagatgtccctcggcgcggacagcagcgaaggcgtcgaccgccgcgcttat
cgccgctga
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integrated database retrieval system
