Sodalis praecaptivus: Sant_3246
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Entry
Sant_3246 CDS
T03004
Symbol
truD
Name
(GenBank) TRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
sod
Sodalis praecaptivus
Brite
KEGG Orthology (KO) [BR:
sod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sod03016
]
Sant_3246 (truD)
Enzymes [BR:
sod01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
Sant_3246 (truD)
Transfer RNA biogenesis [BR:
sod03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Sant_3246 (truD)
Prokaryotic type
Sant_3246 (truD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AHF78238
UniProt:
W0I1B3
LinkDB
All DBs
Position
complement(3706192..3707241)
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AA seq
349 aa
AA seq
DB search
MTDDLDYHRLHWLLGKPAATGRVKAEAADFQVREQLGFAPDGEGEHLLVHLRKTGYNTPD
VAEALAAFAGIPARAVSYAGLKDRHAVTEQWFCLHLPGKSDPDFAAFKLAGCTILAAARH
RRKLRIGALKGNAFTLTLREISDGEDVEARLKRICDEGVPNYFGHQRFGHQGNNLTLALR
WANNALRIKDRSKRSFTLSAARSALFNKVVSQRLAQLGPARLLNGDALQLTGRGSWFVAS
TAEMPALTARLAARELSLTAPMPGEGALGALDEAEAFEHACLATQPALMALLARERLTPA
RRALLLQPEGLSWRWQDPATLTLSFSLPAGSYATAVVRELLDAPADIAH
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgacctggattatcaccggctgcattggctgctcggcaagcccgccgcgacc
ggtcgcgtgaaggccgaggcggcggatttccaggtgcgcgagcagcttggtttcgcgccc
gatggcgaaggggagcacctgctggtgcacctgcgtaaaaccggctacaacacgcccgac
gtcgccgaagcgctggcggcgttcgccggcatccccgcccgcgcggtcagctacgccggg
cttaaagatcgccacgccgtcaccgaacagtggttttgcctgcatctgcccggcaaaagc
gatcccgacttcgcggcctttaaactcgccggctgcactatcctcgccgccgcccgccat
cgacgtaaactgcgtatcggcgccctcaagggcaacgcctttaccctgacgctacgtgag
ataagcgatggtgaggatgtggaggcgcggctgaaacgcatttgcgatgaaggggtgcca
aactatttcggccatcagcgctttggtcatcagggcaataatctgacgctagcgctgcgc
tgggcgaataacgccttgcgcatcaaagaccgcagcaaacgcagctttacgctttctgcc
gcccgcagcgcgttgttcaataaggtggtcagccaacgcttggcgcagttggggccggcg
cgtctattgaacggggacgccctgcaattgaccggccggggtagttggtttgtggcaagc
accgcggagatgccggcgttgaccgcgcggctggcggcgagggagctctccctaacggcg
ccgatgccgggggagggcgcactgggcgcccttgacgaagccgaggcgtttgaacacgcc
tgcctcgcgacgcagccggcgctgatggcgttgctggcgcgtgaacggctaacgcccgcg
cggcgcgcgctgctgcttcagccagaagggttaagctggcgctggcaagatcccgcgacg
ctgacgctttctttcagcctgcctgccggcagttatgccacagcggtagtgcgtgaattg
ctggacgctcccgccgatatcgcccactag
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