Sodalis praecaptivus: Sant_3265
Help
Entry
Sant_3265 CDS
T03004
Name
(GenBank) 23S rRNA 5-methyluridine methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
sod
Sodalis praecaptivus
Brite
KEGG Orthology (KO) [BR:
sod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sod03009
]
Sant_3265
Enzymes [BR:
sod01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Sant_3265
Ribosome biogenesis [BR:
sod03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Sant_3265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_25
PCMT
MTS
Methyltransf_11
RrnaAD
TRM5-TYW2_MTfase
Cons_hypoth95
Methyltr_RsmB-F
Ubie_methyltran
Methyltransf_15
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
AHF78257
UniProt:
W0I0D0
LinkDB
All DBs
Position
complement(3727566..3728900)
Genome browser
AA seq
444 aa
AA seq
DB search
MAQFYSANRRVATRERVTVLCDQLDAFGQGLARHRGKVMFIPGLLPGEQAEVRLTEDKRQ
YSRGEVVRRLNDAPERVAPRCPHYGVCGGCQQQHISQALQQRTKAAALAQLLAREQPGAV
PEVAQIGSSAYGYRRRTRLGLVYRPKSRQLSMGYRQAKSSDLVDIHACPILRPALERLIA
PLRASLQGLRAVAQLGHVELAAADNGPLIVLRHLQPLVEEDRRRLLDFAAAQQVSVWLAP
DSERLECLSGEPPYYRVAALTLRFSPRDFIQINDEVNRQMVAQALDWLAPAPGERVLDLF
CGMGNFTLPLARLSGQVTGVEGVAALVANGQYNAQSNSLSNVTFFHENLEQDVMHQPWAV
GGFDKILLDPARAGAAGVMPLLAAWAPQRIVYVSCNPATLARDSKILLAAGYTLARLAML
DMFPHSGHLESMALFIKRSGISAR
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaattctactctgcaaaccgtcgcgtggcgacccgggaaagggtcacggtcctg
tgtgaccaactggatgcgttcggccaggggctggcgcgccaccggggcaaggtcatgttt
atccccgggctgttgccgggggagcaggccgaggtgcgtctcaccgaggataagcgccaa
tacagccgcggcgaagtggtccgccgcctgaacgatgcccccgagcgggtcgctccccgc
tgcccccattatggggtgtgcggcggctgtcagcagcagcatattagtcaggcgctgcag
cagcgcaccaaggcggcggcgctggcgcagctgttggcgcgcgaacagccaggcgcggtg
cccgaggtggcgcaaatcggatccagcgcctatggttaccggcgtcgcacgcgcctgggg
ttggtctatcgcccgaaatcccgtcaacttagcatgggttatcggcaggcaaagtcgagc
gatttagtcgatattcacgcctgcccgattttgcgaccggcgctcgagcggctcatcgcg
cccttgcgcgccagtctacaggggttgcgggccgtggcgcagctggggcatgtcgaactg
gcggcggcggataacggtccgttgatagtgctgcgccacctgcaaccgctggtggaggag
gatcgtcgccggctgctggatttcgccgccgcccagcaggtcagcgtatggctcgcgccc
gatagcgaacgcctggaatgtctcagcggcgagccgccctattatcgggtagcggcgttg
acgctgcgtttcagtccgcgcgactttatccagatcaatgacgaggtcaaccggcaaatg
gtggcccaggcgctggattggctggcgccggcgcccggcgaacgggtgttggatctcttt
tgcggcatgggcaattttaccctgccgctggcgcgtttgagcgggcaggtcaccggcgtt
gagggggttgcggcgctggtagcgaatgggcaatataatgcgcagagtaattcactaagc
aacgtgactttttttcacgaaaatcttgagcaagatgtgatgcatcaaccgtgggccgtg
ggcggatttgataagatattgctcgacccggccagagcgggtgcggccggcgtgatgccc
ctattggcggcgtgggcgccgcagcgcattgtctacgtttcttgcaatccggcgaccctt
gcgcgggatagcaaaattttattggcggcaggctacaccctggcacgcctggcgatgctg
gatatgtttccgcatagcggccatcttgagtcgatggcgttatttatcaagcgttccggc
atctctgcaagatag
DBGET
integrated database retrieval system
