Sodalis praecaptivus: Sant_3277
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Entry
Sant_3277 CDS
T03004
Symbol
cdaR2
Name
(GenBank) Carbohydrate diacid transcriptional activator
KO
K02647
carbohydrate diacid regulator
Organism
sod
Sodalis praecaptivus
Brite
KEGG Orthology (KO) [BR:
sod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sod03000
]
Sant_3277 (cdaR2)
Transcription factors [BR:
sod03000
]
Prokaryotic type
Helix-turn-helix
Other families
Sant_3277 (cdaR2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Diacid_rec
HTH_30
GGDEF_2
GAF
Motif
Other DBs
NCBI-ProteinID:
AHF78269
UniProt:
W0HWW6
LinkDB
All DBs
Position
complement(3745600..3746757)
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AA seq
385 aa
AA seq
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MATYHLDAKLAQEIVARTMQIIDSNINVMDARGRIIGSGDRERIGELHEGALLALSQARV
VDIDDGVAKHLHGVRPGINLPLKIDGNIVGVIGLTGNPGQLRQYGELVCMTAEMMLEQAR
LLHMLAQDSRLREELVLNLIRAEEVTPALSEWAQRLGIDIHQPRVAAVVEVDSGQFGVDS
AMAELQQLQTLLTTPERDNLIAIVSLTEMVVLKPALNSHGRWDADEHRRRVDSLFSRMTE
SSRLRVRIALGNFFTGPGGIARSWRTAVTTMAVGKQRHPDERRYFYPDLMLPVLLDSLRG
GWQANELVRPLVKLKAMDSNGLLRRTLIAWFRHNVQPTPTSRALFIHRNTLEYRLNRISE
MTGLNLANFDDRLLLYVALQLDDNL
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggcgacttatcatcttgatgccaagctggcgcaggaaatcgtggcaagaaccatgcag
ataatcgacagcaacattaacgtgatggacgcccgtggccggataatcggcagcggcgat
cgggagcgtatcggcgagctgcatgagggcgcgctgctggcgctgtcccaggcgcgggtg
gtggatatcgacgacggggtggccaagcatttgcatggcgtgcgtcccgggattaatctg
ccgctgaaaatcgacggtaatatcgttggcgtcatcgggttaaccggtaatcccggccag
ctgcgccagtatggcgaattggtgtgtatgaccgccgagatgatgctggagcaggcgcgg
ttgctgcatatgctggcgcaggacagccggctgcgcgaagaattggtgctgaatcttatc
cgcgccgaagaagtgacgccggcgctgtccgaatgggcgcagcgcctggggatcgatatt
catcagccgcgcgtggcggcggtggtggaggtggacagcgggcagtttggcgtcgatagc
gccatggccgagctgcaacagttacagaccctgttgactacccctgagcgggacaatctt
atcgctatcgtctccctgaccgaaatggtggttttgaagccggcgctgaacagccacggc
cgctgggatgccgacgagcaccggcgccgcgtggatagtctattttcccgcatgaccgaa
agcagccgcctgcgggtgcgtatcgcgctgggtaacttttttaccggaccgggagggatc
gcccgctcctggcgcaccgccgttaccaccatggcggtgggcaagcagcgccacccggac
gagcgccgctatttttatcccgatttgatgttgccggtgttattggacagcctgcgcggc
ggttggcaagccaatgagctggtgcggccgctggtcaaactcaaggccatggacagcaac
ggtttattgcgacgaacccttatcgcctggtttcgccataacgtgcagccgacgcccacc
tcgcgcgcgctgtttattcatcgcaatacgctggaataccgtttgaaccgcatttccgaa
atgaccggcctgaatctggccaactttgacgatcggctgctgctgtatgtagcgctacag
ctggatgataatctctga
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