Sodalis praecaptivus: Sant_3301
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Entry
Sant_3301 CDS
T03004
Symbol
mrcB
Name
(GenBank) Penicillin-binding protein 1b
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
sod
Sodalis praecaptivus
Pathway
sod00550
Peptidoglycan biosynthesis
sod01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sod00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Sant_3301 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sod01003
]
Sant_3301 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sod01011
]
Sant_3301 (mrcB)
Enzymes [BR:
sod01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
Sant_3301 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Sant_3301 (mrcB)
Glycosyltransferases [BR:
sod01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
Sant_3301 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
sod01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
Sant_3301 (mrcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
PBP1_TM
UB2H
Transpeptidase
UvrB_inter
Motif
Other DBs
NCBI-ProteinID:
AHF78293
UniProt:
W0I1G7
LinkDB
All DBs
Position
complement(3773093..3775624)
Genome browser
AA seq
843 aa
AA seq
DB search
MSGDDREPIGRHGRPSGRKAPRKAAPRRRRDDDYDDDDRWQDDDDDDEEEYVMPPRKGRG
GAPRKKRRLLGWVIRLVLLFVVVIAIYGVYLDAQVRHRIDGKVWQLPAAVYGRMVSLEPG
MSYSRSDMATLLEGMQYREVSRITRPGEFTVRGNSIELLRRPFDFPDGKEGQIHARMTFA
KNQLLEIKNQDTQRNFGFFRLDPRLITMLQSPKGEQRLFVPRAGFPDLLVDTLIATEDRH
FYEHDGISLSSIGRAFLANITAGRAVQGGSTLTQQLVKNLFLTNERSLWRKANEAYMALI
VDYRYSKDRILELYLNEVYLGQSGGDQIRGFPLASLYYFGRPVDELSLDQQAMLVGMVKG
ASLYNPWRNPKLALERRNLVLKLLENQQIIDGELYNMLSARPLGVQPRGGVLTPQPAFMQ
MVREELQSKLGDKINDLSGVKIFTTLDPLSQDAAEKAVEAGVPALRAGRGVKDLEAAMVV
VDRFSGEVRAMVGGAEPQFAGFNRAMQARRSVGSLAKPATYLTALSEPDKYRLNTWIADE
PITLKQPNGSLWSPKNYDRQFRGKVMLVDALTNSLNVPTVNLGLSVGLDRITATLVKLGI
PSSVLNPVPSMLLGAISLTPMEVAQEFQTIASGGNHATLSAVRSVIGEDGTVLYQSFPQA
ERVVPAQAAYLTLYAMQQVVVRGTSRSLSVKFPSSHLAAKTGTTNDLRDSWFAGIDGKEV
SIAWVGRDNNGPAKLTGANGALTLYRRYLENQAPLTLNLTPPEGISQMSIDYAGNFVCNG
GSAMRTLPVWTDDPQSLCQPAQAQVQPQPDAASSGQPQQSAPPQDEQKDSNGVANWIREM
FGK
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgtctggggatgaccgtgaacctatcggacgtcatggacgaccgtcaggccgcaaggct
ccgcgcaaggctgcaccgcgccgccggcgggatgatgattacgatgatgatgaccgctgg
caggatgatgatgatgatgacgaagaggagtacgtgatgccgccgcgaaagggaagggga
ggcgcgccgcgcaagaaacgccggctgctgggctgggttatccgcctcgtgctgctgttc
gtcgtcgttatcgctatctatggcgtgtatttggatgcgcaggtccgtcaccgcatcgat
ggcaaagtctggcaactcccggcggcggtttatggccgcatggtgagtttggagccggga
atgtcctacagccgcagcgacatggcgacgttgctcgaaggcatgcagtaccgcgaggtg
tcgcgaattacccggccgggcgaattcaccgtgcgcggcaacagcattgagctgctgcgc
cggccgttcgatttcccggacggcaaagaggggcaaatccatgcccgtatgacgttcgcc
aaaaatcagctcctggagatcaaaaaccaggacacccagcgtaatttcggctttttccgc
ctcgatccgcgtcttatcaccatgttgcaatcgcccaagggcgaacagcggctgttcgta
ccgcgcgccggtttcccggacctgctggtggataccctgatagccaccgaagaccggcat
ttctacgagcatgacggtatcagcctctcctccatcggccgcgcctttctggccaatatt
accgccggtcgcgcggtgcagggggggagtacgctaacgcagcagctggtgaaaaacctg
tttttgaccaacgaacgctcgctgtggcgcaaggccaatgaagcctatatggcgttgatc
gtcgattaccgttacagcaaggatcgcatcctggagctgtatctgaacgaggtgtatctc
ggccagagcggcggcgatcagattcgcggtttcccgctggccagcctgtactatttcggc
cgtccggtggatgaactcagtctcgatcagcaggcgatgctggtggggatggtgaaaggc
gcgtcgctgtataatccttggcgcaaccccaagctggcgctggagcgccgcaatctggtg
ctgaaactgctggagaatcagcaaatcatcgacggcgagctgtataacatgctcagcgcc
cgcccgctgggggtgcagccgcgcgggggggtattgacgccgcagccggctttcatgcag
atggtgcgcgaagagctgcaaagcaagctgggcgacaaaatcaacgatctctccggcgtc
aagatcttcaccaccttggatcccctttcgcaggatgcggcggaaaaagcggtggaggcg
ggcgtgcccgcgttgcgcgccgggcgcggcgttaaggatctggaggccgcgatggtggta
gtcgatcgcttcagcggcgaagtgcgcgccatggtcggcggggcggagccgcaattcgcc
ggctttaaccgcgcaatgcaggcgcggcgctcggtgggttcgctggcaaaaccggccacc
tatctgaccgcgctgagcgagccggataaatatcggctcaatacctggattgccgatgaa
ccgattaccctcaagcagccgaacggcagcctatggtcgccgaaaaactacgatcggcag
ttccgcggtaaagtgatgctggtggatgcgttgaccaattcgcttaacgtgccgacggtc
aacctcggcctgtcggtggggcttgatcgtattaccgctaccctggtgaagcttggcata
ccgtcctcggtgctgaacccggtcccctccatgctgcttggcgccatcagcctcacgccg
atggaagtggcgcaggagttccagaccatcgccagcggcggtaaccatgccacgctgtcg
gcggtgcgctcggtgataggggaggacggcaccgtgctgtatcaaagcttcccgcaggcg
gagagggtggtaccggcccaggccgcttacttgacgctgtatgcgatgcaacaggtggtg
gtgcgcgggacatcgcgttcgctgtcggtgaaattcccgtcttcgcatctggcggcgaaa
accgggaccactaacgatttgcgcgatagctggttcgccggtatcgacggcaaagaggtg
tccattgcctgggtcggccgcgataacaacggtcccgccaagttgaccggcgccaacggc
gcgctgacgctgtatcgtcgttatctggagaaccaggcgccgttgacgctgaacttgacg
ccgccggagggcatcagccagatgtccatcgactatgccggcaattttgtctgtaacggc
ggcagcgcgatgcgcacgttgccggtgtggacggacgatccgcagtcgctatgccagccg
gcccaagcgcaagtgcaaccacagcctgacgccgcgtcgagcgggcaaccgcagcaaagc
gctccgccgcaggatgagcagaaagacagcaacggcgtggcgaactggattcgggagatg
ttcggcaaataa
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