Sodalis praecaptivus: Sant_3307
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Entry
Sant_3307 CDS
T03004
Symbol
pcnB
Name
(GenBank) Poly(A) polymerase I
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
sod
Sodalis praecaptivus
Pathway
sod03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sod00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Sant_3307 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sod03019
]
Sant_3307 (pcnB)
Enzymes [BR:
sod01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
Sant_3307 (pcnB)
Messenger RNA biogenesis [BR:
sod03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Sant_3307 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AHF78299
UniProt:
W0HWZ7
LinkDB
All DBs
Position
3781258..3782679
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AA seq
473 aa
AA seq
DB search
MLLLRCTIFTRVANFCRKVLNRESVETAPEDRRPLTIIPRDQHSISRKEISENALKVLYR
LNKAGYEAYLVGGGVRDLLLGKKPKDFDITTSATPEQMRKLFRNCRLVGRRFRLAHVMFG
PEIIEVATFRGHHQVLEPEEGAAGAALTGHNGMLLRDNIFGSIEEDAQRRDFSVNSLYYS
VADFTLRDYTGGLKDLREGTIRLIGDPETRYREDPVRMLRAVRFAAKLDMTISRETAEPI
PRLAALLHDIPPARLFEEALKLLQAGYGEATYRLLCEYQLFQPLFPLISRNFTEHGDSYM
EQMVIRVLANTDQRLRNDMRVNPAFLFAAMLWYPLLEHAQKLTQESGLSYFDAFSLAMND
ILDEQCRTLAIPKRLTALMRDMWQLQLRLSRRQGKRAHKLMEHPKFRAAYDLLTLRADVE
NNAELQRLSRWWGEFQVAAPPRQKNMLTTLGDDAPARARPRRPRRRAPNRDNA
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
ttgttactattgaggtgtactatttttacccgagtagccaacttctgccgcaaggtgctc
aatcgtgaaagcgtggaaacggcaccagaggatagacgccctttgacgattatcccgcgc
gaccagcactccatctctcgtaaagagatcagtgaaaatgctttaaaggtgctttaccgc
ttgaacaaagcgggatacgaagcctatttggtcggcggcggcgttcgcgatctgctgctg
ggtaaaaaacccaaggacttcgacatcacgaccagcgccacgccggagcagatgcgtaaa
ctgtttcgcaactgccgactggttggccgccgttttcggctggcccacgtcatgttcggg
cctgagattatcgaagtcgccacgttccgcggccatcatcaggtgctggagcccgaggaa
ggcgccgcgggggccgccctcaccggccacaacggcatgctgctgcgcgacaatattttc
ggctccatcgaagaagacgcccagcgccgcgacttctcggtgaacagcctgtattacagc
gtggccgattttacgctgcgcgactataccggcggactgaaagatttacgcgaagggacg
attcgcctgattggcgatccggaaacccgctatcgggaagacccggtccgcatgctgcgc
gcggtgcgttttgccgccaagctggacatgaccatcagccgcgaaaccgccgaaccgatc
ccccgactggcggcgctgctgcacgatattcccccggcgcggctgtttgaagaagccctc
aagctgctacaggcgggctacggagaagctacctaccgcctgctgtgcgaataccaactg
ttccaaccgctgtttccgttgataagccgtaactttaccgagcacggcgacagttatatg
gaacagatggtgatccgcgtactggccaacaccgatcagcgtttgcgcaatgatatgcgg
gtcaatccggctttcttattcgccgccatgctgtggtatccactgttagaacatgcgcag
aaactgacccaggaaagcggcctgtcctattttgacgctttctcgctggcgatgaacgac
attctcgacgaacagtgccgcacgctggcgatacccaaacgcttaaccgccctgatgcgc
gatatgtggcaacttcagctgcggctgtctcgccgccagggcaagcgcgcccacaagctg
atggaacatcccaaattccgtgccgcctatgatttgctgacgctgcgcgccgacgtggaa
aacaacgccgaactgcagcggctcagccgctggtggggggagttccaagtggccgcgccg
ccgcggcaaaagaacatgctgaccacgctcggcgatgacgcgccggcccgcgcccgtccg
cgccgcccgcgccgtcgggcacccaaccgcgacaacgcctga
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