Sodalis praecaptivus: Sant_3434
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Entry
Sant_3434 CDS
T03004
Symbol
holD
Name
(GenBank) DNA polymerase III subunit psi
KO
K02344
DNA polymerase III subunit psi [EC:
2.7.7.7
]
Organism
sod
Sodalis praecaptivus
Pathway
sod03030
DNA replication
sod03430
Mismatch repair
sod03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Sant_3434 (holD)
03430 Mismatch repair
Sant_3434 (holD)
03440 Homologous recombination
Sant_3434 (holD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sod03032
]
Sant_3434 (holD)
03400 DNA repair and recombination proteins [BR:
sod03400
]
Sant_3434 (holD)
Enzymes [BR:
sod01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Sant_3434 (holD)
DNA replication proteins [BR:
sod03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Sant_3434 (holD)
DNA repair and recombination proteins [BR:
sod03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Sant_3434 (holD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_III_psi
Motif
Other DBs
NCBI-ProteinID:
AHF78426
UniProt:
W0HX74
LinkDB
All DBs
Position
complement(3939047..3939460)
Genome browser
AA seq
137 aa
AA seq
DB search
MTTRRDWLLQQLGITQWTLRRPAVLQGEVAITLPGHIRLLLVAEAPPPLDHPLVADVARS
MALTPAQLCGVTPLQVMMLPDDVRCHCWWLGLDALREFEGMSFHTPPLAALSGDAGAKRE
LWRRISDDEYHITAAAG
NT seq
414 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaaggcgcgattggctgttacaacaactgggcattacgcaatggacgctccgg
cgcccggcggtgctacagggggaggtggcaatcaccttgccggggcatattcgtttattg
ctggtggccgaggcgccgccgccgctcgatcatccgctggtggccgatgtggcgcgcagc
atggcgctgacgccggcgcagctctgcggggtgacgcctttacaggtgatgatgctgccg
gacgatgtccgttgccattgctggtggctcggccttgacgccctgcgtgaattcgaggga
atgtctttccatacgccgccgctggcggcgctttcaggggatgctggcgccaagcgcgag
ctatggcgccggataagtgatgatgaataccatattaccgctgctgccggctga
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