Sodalis praecaptivus: Sant_3451
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Entry
Sant_3451 CDS
T03004
Symbol
truB
Name
(GenBank) TRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sod
Sodalis praecaptivus
Brite
KEGG Orthology (KO) [BR:
sod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sod03016
]
Sant_3451 (truB)
Enzymes [BR:
sod01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Sant_3451 (truB)
Transfer RNA biogenesis [BR:
sod03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Sant_3451 (truB)
Prokaryotic type
Sant_3451 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
DUF5791
Motif
Other DBs
NCBI-ProteinID:
AHF78440
UniProt:
W0I1V3
LinkDB
All DBs
Position
complement(3955622..3956563)
Genome browser
AA seq
313 aa
AA seq
DB search
MGRPSRRGRDIDGIVLLDKPLGLSSNDLLQKVKRLFRANKAGHTGALDPLATGMLPVCLG
EATKFSQHLLEADKRYRVTARLGERTDTSDAEGQTVSVRPVSLDQARLEAALDHFRGESR
QVPSMFSALKHQGRPLYEYARKGITVEREARPIHVYDLQLHHWDLTEVELEIHCSKGTYI
RTIIDDLGERLGCGAHVTALRRLAVARYPTERMVTLAALQAIAADAPETPETLAQLDALL
LPMDSAVADMPAVNLPSDVAARVRLGQTVAVTAQPQAGLVRLTEGDAGRFFGIGEIAAPG
RLTPRRLIAEPRA
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgggccgtccaagtcgccgtggccgtgatatcgacggcatcgtcttgctggataaaccg
ctcgggctttcgtccaacgatctgctgcaaaaggtaaaacgcctgtttcgcgccaacaaa
gctgggcataccggcgcgctggatccgctggcgaccggcatgttgcccgtctgcctcggc
gaggcgaccaagttttcccagcatttgctggaggccgataaacgctaccgggtgaccgcc
cggctcggcgaacgcaccgatacctccgatgccgaaggccagacggtcagcgtccggccg
gtatcgctggaccaagcgcggctggaggcggcgctggaccacttccgcggcgaaagccgg
caggtgccgtcgatgttttcggcgctgaagcatcaggggcgtccgctgtacgagtacgcc
cgcaaaggtattaccgtagagcgcgaggcgcgccccatccacgtatacgatttgcagtta
caccactgggacctgacggaggtggaactggaaattcattgttccaaaggcacctacatc
cgcaccattatcgatgatttgggtgaacgtctcggctgcggcgcgcacgtcacggcgctg
cgtcggttggcggtcgcccgctaccccaccgagcgtatggtaacgcttgcggcgctgcag
gccatcgccgccgacgcgccggagacgccggaaaccctggcgcaactggatgcgctgctg
ttgccgatggacagcgcggtggcggatatgccggcggttaatctgccgtctgatgtcgcc
gcgcgggtccggcttgggcaaacggtagcggttacagcgcagccgcaggccggtctggta
cgcttgaccgagggggatgccgggcgtttcttcggcatcggcgaaatcgccgcgccaggc
cggctgacaccgcgccgcctgatagcggaaccgcgtgcctga
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