Sodalis praecaptivus: Sant_3799
Help
Entry
Sant_3799 CDS
T03004
Symbol
lsrA
Name
(GenBank) AI-2 transporter
KO
K10558
AI-2 transport system ATP-binding protein
Organism
sod
Sodalis praecaptivus
Pathway
sod02010
ABC transporters
sod02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sod00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Sant_3799 (lsrA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Sant_3799 (lsrA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sod02000
]
Sant_3799 (lsrA)
Transporters [BR:
sod02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
AI-2 transporter
Sant_3799 (lsrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_22
RsgA_GTPase
AAA_30
KdpD
AAA_29
MukB
AAA_23
Motif
Other DBs
NCBI-ProteinID:
AHF78777
UniProt:
W0I1V8
LinkDB
All DBs
Position
4357901..4359448
Genome browser
AA seq
515 aa
AA seq
DB search
MRHEKNSPLLSARSVHKQYSGVNVLKGIDFVLHKGEVHALLGGNGAGKSTLMKIIAGITP
ADSGIIEIEGARCTKLSPVLAHQLGIYLVPQEPLLFPSLTVKENILFSLPKHQKSVQKMA
SMLLALGCQFDINSPAGSLDVADRQMVEIMRGLMRDSRILILDEPTASLTPAETDRLFSR
LRELLSTGVGIVFISHKLPEIRQIADCISVMRDGTIALSGKTTDLTTDEIIQAITPASRT
TALSATQKLWLELPGNRSQHAAGTPVLTLENLTGEGFMNVSFDVRAGEILGLAGLVGAGR
TELAETLYGLRPRRAGRVVLNAQDISTLSTRERLQRGLVYLPEDRQSSGLNLDASLAWNV
CALTHNDSGFWAKPVKDCATLERYRRALNIKLNDPEQPARTLSGGNQQKILIAKCLEASP
QVLIVDEPTRGVDVSARNDIYQLIRSIAAQNVAVLFISSDLEEIEQMADRVYVMHQGETG
NDALLGDDINVDTIMHVAFGDRASGTTQHTGEASC
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcacgaaaaaaactcaccgctgctcagcgcccgatcagttcataaacagtactct
ggcgtcaacgtactgaaaggcatcgactttgttttgcacaaaggcgaggtacatgcgcta
ttagggggaaatggcgcggggaaatcgacgttgatgaaaatcatcgccggtattacccct
gccgatagcggcattattgagattgagggagcccgctgcacaaaactgtcccccgtgctg
gcgcaccagttgggcatatacctggtgcctcaggaaccgctgctgtttcccagcctgacg
gtaaaggagaatattctctttagcctgcccaaacatcagaaatcggtgcagaaaatggct
tcgatgctgctcgcgctcggctgtcagttcgatatcaacagccctgcgggttcactggat
gtcgccgaccgtcagatggtcgaaattatgcgtgggctaatgcgcgattcacgcatttta
attctcgacgagcccaccgcatcactgacgccggcagaaacggatcgcctgttcagccgc
ctgcgggaattactgagcaccggcgtggggatcgtgtttatctcccacaagctgcccgaa
atacgtcagattgccgactgcatcagcgtgatgcgcgacggaaccattgcgttatccggt
aaaaccacggacctcaccaccgacgagattattcaggctattacgccagcctcacggacc
accgccctgagcgcgacacaaaaactgtggctggagctgcctggcaaccgttcccagcac
gcggcgggcacaccggttttgaccctggaaaacctgacgggtgaagggtttatgaacgtc
agttttgacgtgcgcgccggggaaattttaggtctggccggacttgtcggcgcagggcgt
accgaactggcggaaaccctgtatgggcttcgaccccggcgggcgggacgcgtcgtgctc
aatgcgcaggacatctccacgctttccacgcgcgagcgcctgcagcgtggactggtctat
ctgccggaagatcgacaatcttcagggttgaatctggatgcctcgctggcgtggaatgtc
tgtgccttaacgcataacgacagcggcttctgggccaaaccggtaaaagattgcgccacg
ctcgaacgctaccggcgggcgctcaatatcaagctcaacgatcccgagcagccggcccgc
acgctttcaggcggcaatcaacaaaagattttgatcgccaaatgtctcgaagcctcaccg
caggttctgatcgtggatgaacccacacgcggcgtggacgtctctgcccgcaacgacatc
tatcagctgatccggagtatcgcggcacagaatgtcgcagtgctgtttatctcttccgac
ctggaagagattgaacagatggccgatcgcgtttacgtcatgcatcagggagaaaccggc
aatgacgcccttttgggcgacgatatcaatgtcgacaccatcatgcacgttgccttcggc
gaccgcgcgtcagggaccacgcagcatacaggggaggcatcatgttga
DBGET
integrated database retrieval system