Sodalis praecaptivus: Sant_3937
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Entry
Sant_3937 CDS
T03004
Symbol
birA
Name
(GenBank) Biotin--protein ligase
KO
K03524
BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:
6.3.4.15
]
Organism
sod
Sodalis praecaptivus
Pathway
sod00780
Biotin metabolism
sod01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sod00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
Sant_3937 (birA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sod03000
]
Sant_3937 (birA)
Enzymes [BR:
sod01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
Sant_3937 (birA)
Transcription factors [BR:
sod03000
]
Prokaryotic type
Helix-turn-helix
Other families
Sant_3937 (birA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BPL_LplA_LipB
BPL_C
HTH_11
BPL_LplA_LipB_2
LplA-B_cat
Motif
Other DBs
NCBI-ProteinID:
AHF78900
UniProt:
W0I340
LinkDB
All DBs
Position
complement(4524361..4525320)
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AA seq
319 aa
AA seq
DB search
MKDVTIPLKLISLLADGEFHSGEQFGAALGMSRAAINKHVQTVRDWGVDVFTVPGKGYRL
HAPLQLLDEAAIRSRLPSGRLAVLPVIDSTNQYLIERIGTLAPGDACVAEYQAQGRGRRG
RQWISPFGNNLYLSLYWRLEQGPAAAGGLSLMVGIVMAEVLQRLGAEGVRVKWPNDLYLN
DRKLAGILVEINGKAGDAAHVVIGAGINLAMREPAAGMIDQGWINLQEAGIVIDRNALVA
ELTATLRQALRQFEGEGFAPFVARWQALDNFFDRPVKLLIGDREIRGIARGIDAQGALLL
EQDGERHAYLGGEISLRGL
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacgtgaccatcccgcttaagctgataagtttactggccgatggcgagtttcat
tccggcgagcaatttggtgcggcgttgggaatgagccgcgccgccatcaacaagcacgtt
caaacggtgcgcgactggggggtggatgtctttacggtgcccggtaaaggctaccgtttg
catgcgccgctgcagttattggatgaagccgcgatccgttcgcgcctaccgtcgggtcgc
ctggcggttctgccggttattgactcaaccaatcaatatttgatcgagcgtatcggcacc
ttagcgccgggtgacgcctgcgtggcggaatatcaggcgcagggacgcggtcgacgcggt
cgacagtggatttcgccgttcggcaataatctttatctgtccctttattggcgtcttgag
cagggtccggcggccgccggcggcctcagtctgatggtcggtatcgtcatggcggaggtg
ctgcagcgactgggcgctgaaggggtgcgcgtcaaatggccgaacgacctgtatctcaac
gatcgcaaactggccgggatcttggttgagattaacggtaaggccggcgatgccgcccat
gtcgtgatcggcgccggtattaacctggcgatgcgcgagcctgcggcggggatgatcgac
cagggttggatcaatttgcaggaagcgggcatcgtcatcgatcgcaatgcgctggtcgcc
gaattgaccgctacgctgcgtcaggcgctgcggcagttcgagggcgaggggttcgcgccc
tttgtcgcccgctggcaggcgttggataacttctttgaccggccggtgaaattactcatt
ggcgatcgggagataaggggcattgcgcgcggcatcgacgcgcaaggggccctattgttg
gagcaggacggagaacgccacgcctatttgggcggagagatatcgctacgcggtctttag
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