Sodalis praecaptivus: Sant_3966
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Entry
Sant_3966 CDS
T03004
Symbol
priA
Name
(GenBank) Primosome assembly protein
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
sod
Sodalis praecaptivus
Pathway
sod03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Sant_3966 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sod03400
]
Sant_3966 (priA)
Enzymes [BR:
sod01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Sant_3966 (priA)
DNA repair and recombination proteins [BR:
sod03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Sant_3966 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WHD_PriA
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
Zn_ribbon_6
AAA_19
TrwB_AAD_bind
AAA_22
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
AHF78922
UniProt:
W0I2E4
LinkDB
All DBs
Position
4560437..4562632
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AA seq
731 aa
AA seq
DB search
MPVVNVALPVPLARTFDYLLPANAAPAVGGRVRVPFGQRQAIGIVTAIREHSDVALDKLK
PISEVLDDRSLFSDSLWRILNWAIGYYHYPAGEVLFHALPILLRQGKPAEMAPLWQWFAT
EQGRSTLPDSLKRAPKQQQALAALLRGPVYRHQVGELLLADPALQALRAKGLCDLRPQAV
EASDWRPGFGVNGERLRLNTEQATAVGAIRSEDDRFTAWLLAGVTGSGKTEVYLTVLENI
LAKGQQALVLVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLAVWLKARRGECAIVI
GTRSALFTPFARLGIIVIDEEHDSSYKQHEGWRYHARDLAVFRAREENIPIVLGTATPSL
ETLYNVQQKKYRQLTLAKRAGSARPAGQHLLDMKGLPLTHGLSTPLLDKMRAHLQAGNQV
MLFLNRRGFAPALLCHECGWIAECQRCDHYYTLHQHQRQLRCHHCDSQRPLPHQCPQCGS
TQLVAVGLGTEQLEAALTPLFPEVPVTRIDRDTTARKGALEDYLAQVQRGGARILIGTQM
LAKGHHFPDVTLVSLLDVDGALFSGDFRAAERFAQLYTQVAGRAGRAGKQGEVLLQTHHP
EHPLLQTLLHHGYMDFANQTLEERRQAGLPPFTSHILFRADDHDNRQAGLFLDQLRQLLD
ASPLRDNALWLMGPIPALAPKRGGRFRWQLLLSHPSRPHLQRLVAASLPLISTLTQARKV
KWSLDVDPLDG
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgcccgttgtaaacgtcgcattaccggtgccgctggctcggacttttgattaccttttg
cccgctaacgccgcgcctgcggttggggggcgggtgcgggttccgtttggtcaacgccag
gccattggtatcgtcaccgccatccgcgagcacagcgacgtggccctggacaagttaaag
cctatcagcgaagtgctcgacgaccggtcgctgttttccgacagcctctggcgcatactg
aactgggccatcggctactaccattaccccgccggcgaagtgctgttccacgctctgccg
atcctgcttcgtcagggcaagcccgctgagatggcgccgctatggcagtggttcgccacg
gaacaggggcgcagcacgctgcccgatagtctgaagcgagcgcccaaacagcaacaggcg
ctggcggcgctgctgcgcgggccggtttatcgccaccaggtaggcgagctgctgcttgcc
gacccggcgctgcaggcgctgcgcgccaaaggattatgcgatctgcggccccaggcggtg
gaggcaagcgactggcggccagggttcggcgttaacggcgaacggttgcggctgaacact
gaacaggccaccgccgtgggcgctattcgcagcgaggacgatcggttcaccgcctggctg
ctggccggcgtgaccggctccggcaagaccgaggtttatctgacggtgctggagaatatt
ctggccaaagggcagcaggcgctggtgctagtgccggaaattggtctgacgccgcaaact
atcgcccgctttcgtgagcgcttcaatgcgccggtagaggtcctgcattcggggctcaac
gacagcgaacggctggcggtctggcttaaagcgcgacgcggcgaatgcgctatcgtcatc
ggaacccgttcggcattgttcaccccgttcgcccggttggggattatcgtcatcgacgag
gagcacgatagttcttataagcagcacgaaggctggcgctaccacgcccgcgacctggcg
gtttttcgcgcgcgggaagaaaatataccgatagtgctcggcaccgccacgccgtccctc
gaaaccctttataatgtacagcagaaaaaataccgccagctcaccttggccaaacgggcc
ggcagcgcccgaccagccggccagcacttgctggatatgaaggggctaccgctgacccat
ggcctctcaacgccgctgctggataaaatgcgcgcacatctacaggccggcaatcaggtc
atgctgtttcttaaccggcgcggcttcgcgcctgcgctgctgtgccatgaatgcggctgg
atcgccgaatgccaacgctgcgatcactactacacgctacatcagcatcagcgtcaattg
cgctgccaccactgcgacagccagcgcccgctgccgcatcaatgcccacagtgcggctcc
acccagttggtggccgtcgggttaggcactgaacagctggaggcggcgttgacgccgctg
tttccagaggtgccggtgacgcgaatcgatcgcgacaccacggcgcgcaaaggcgcgctt
gaggactatctggcccaggtacagcgcggcggcgcgcggattttaatcggcacccaaatg
ctggccaaaggccaccactttccagatgttacgctggtttcgctgctggacgtggatggc
gcgctgttctccggcgatttccgcgccgccgaacgtttcgcccaactttatacccaggtt
gccggccgtgccggccgcgccggcaaacaaggggaggttttactgcaaacccaccatccc
gagcatcccctgctgcaaacgttgctgcatcacggttatatggacttcgccaatcaaacg
ctagaggaacgccgccaggcgggcctgcctccctttaccagtcatatcctgtttcgcgcg
gacgatcacgacaaccgccaggcggggctgttccttgatcaattacgccagctgctggac
gccagcccgctgcgggataacgccctgtggctcatggggcctatccccgcgctggcgccc
aagcgcggcgggcgttttcgctggcagttgctgttgtcgcacccctcgcgtccgcatttg
caacgcctggtggccgccagtttaccgctgataagcaccctgactcaggcgcgcaaggtt
aaatggtcgctggatgtggatcccctcgacggctga
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