Sodalis praecaptivus: Sant_3967
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Entry
Sant_3967 CDS
T03004
Symbol
cytR
Name
(GenBank) DNA-binding transcriptional regulator
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
sod
Sodalis praecaptivus
Brite
KEGG Orthology (KO) [BR:
sod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sod03000
]
Sant_3967 (cytR)
Transcription factors [BR:
sod03000
]
Prokaryotic type
Helix-turn-helix
LacI family
Sant_3967 (cytR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_Tnp_ISL3
TetR_N
Motif
Other DBs
NCBI-ProteinID:
AHF78923
UniProt:
W0I3D8
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All DBs
Position
4562778..4563818
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AA seq
346 aa
AA seq
DB search
MEQKRSRTCAATMRDVALQAGVSTATVSRALMRPEKVSPATLQRVRRAACSIGYAPLTPG
RLIKRDESATLLALLPDSGDPHLSEVLRGIQETAAAQGYWLLLLPYRPAPTQKKSLSDMI
YGRTIDGMLLLGADVPFRIDGDTRSTLPPMVMVNEYVPALALPTVHTDNLTAAWRAVDYL
YRLGHRRIGCISGPAQLPACRLRLEGYRHALRRHGIAPREQGVFQGALNCQTGKAGLNML
ISRPQPPTAIFCHSDMIALGALAQAKVLGLRVPEELSLTGFGNLTAAAHCCPPLTTVAPP
SYCIGREAVLLLLRQLRQHATRAAASVMLDSELVIRGSSALPQTRH
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
gtggaacagaaaaggagccgtacctgcgctgcgacaatgcgagatgtggcgctgcaggcg
ggcgtttccaccgcgaccgtctcacgggcgctgatgcgtccagaaaaagtgtcgccggca
acgctgcagcgcgtgcggcgggcggcgtgcagcatcggttatgcgccgcttacgccgggc
cgcctgataaaacgcgacgagagcgctacgcttctggcgttgctgcccgatagcggcgac
ccgcacctcagcgaggttttgcgcggtatccaggaaaccgccgccgcgcaaggctattgg
ctgctgctgctgccatatcgccctgcgccgacgcagaaaaaaagccttagcgacatgatc
tacggcagaacgattgatggtatgttgctgctcggcgccgatgtgccgtttcgcatcgat
ggcgatacgcgctcaaccctgccgccgatggttatggtgaatgaatatgtgccggcgctg
gcgctgccgacggtgcatactgataatttgaccgcggcctggcgtgcggtggattatctc
tatcggctgggccatcgccgcatcggctgtatcagcggtccggcgcagttgccggcgtgc
cggctgcgtctggaggggtaccgtcatgcgctgcgccgtcacggcatcgcgccgcgagaa
caaggtgtctttcagggcgcgctaaattgccagaccggcaaagcgggacttaacatgttg
atttcacgaccacagccgcctaccgctatcttttgccatagcgatatgatagcgctaggg
gcgctggcgcaggcgaaagtgctcggcctcagagtaccggaagaattatccctgaccggg
tttggcaatttaacggcggcggcccactgttgcccaccgctcacgacggtggcgcccccc
agttattgcataggccgcgaagcagtgctgttactcttgcgccaactcaggcaacatgcg
acaagggcggcagcctctgtcatgctcgacagtgaattggtcatccgcgggtccagcgct
ctgccccagacacgtcactga
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