Sodalis praecaptivus: Sant_4002
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Entry
Sant_4002 CDS
T03004
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-mannoheptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
sod
Sodalis praecaptivus
Pathway
sod00541
Biosynthesis of various nucleotide sugars
sod01100
Metabolic pathways
sod01250
Biosynthesis of nucleotide sugars
Module
sod_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
sod00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Sant_4002 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sod01005
]
Sant_4002 (rfaD)
Enzymes [BR:
sod01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
Sant_4002 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
sod01005
]
Core region
Sant_4002 (rfaD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
ThiF
Ldh_1_N
adh_short
Motif
Other DBs
NCBI-ProteinID:
AHF78958
UniProt:
W0I3G8
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All DBs
Position
4595925..4596857
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AA seq
310 aa
AA seq
DB search
MIVVTGGAGFIGSNIVKALNQIGYNDILVVDNLKDGTKYANLVDLNITDYMDKEDFIASI
VAGDDFGDIDAVFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCMERTIPFLYASSAATY
GGRTENFIEDRQYEQPLNVYGYSKFLFDQYVRALLPQAESQICGFRYFNVYGPREGHKGG
MASVAFHLNNQINAGENPKLFAGSEGFKRDFVYVGDVAAVNLWFWQNSVSGIFNCGTGRA
ESFQTVADAVLDYHKKGQLEYIPFPEKLKGRYQAYTQADLTQLRAAGYQQPFKTVAEGVA
EYLRWLNHNH
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgatagttgtcactggtggggccggttttatcggcagtaatatcgtcaaggcgttaaat
cagatcggctacaacgatattttggtggtggataacctgaaagacggcaccaaatatgcc
aatctggtcgacctcaatatcactgattatatggataaagaggatttcatcgccagtatc
gtcgccggcgatgatttcggcgatattgatgcggtattccatgaaggcgcctgttcttcc
accaccgagtgggacggcaagtacatgatggataacaattatcagtactctaaagagctg
ttgcactactgcatggaacgcaccattcccttcctgtacgcctcttccgcggcaacttac
ggcggtcggacggaaaacttcattgaggatcgccagtacgaacagccgttgaatgtttat
ggctattccaaattcctcttcgatcagtacgtacgtgcgctgttgccgcaggccgagtcg
caaatttgtggcttccgttatttcaatgtgtatggcccgcgcgaagggcataaaggcggc
atggcgagcgtggccttccatttgaataaccaaatcaacgccggtgaaaatccaaaactg
tttgccggcagcgaaggtttcaaacgcgatttcgtctatgtgggcgacgtggcggcggta
aatctttggttctggcaaaacagcgtctcggggatttttaattgcggcaccggccgagcg
gaatctttccagaccgtcgcggacgccgtgctggattatcataaaaaaggccagttagaa
tacattccgttccctgaaaaactgaaagggcgctatcaggcctacacccaggcggatctc
acccagctacgcgccgccggttatcagcaaccgtttaaaaccgtcgccgaaggggtcgcg
gaatatttacgctggttgaaccataaccattga
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