Sodalis praecaptivus: Sant_4082
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Entry
Sant_4082 CDS
T03004
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sod
Sodalis praecaptivus
Pathway
sod03030
DNA replication
sod03410
Base excision repair
sod03420
Nucleotide excision repair
sod03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Sant_4082 (polA)
03410 Base excision repair
Sant_4082 (polA)
03420 Nucleotide excision repair
Sant_4082 (polA)
03440 Homologous recombination
Sant_4082 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sod03032
]
Sant_4082 (polA)
03400 DNA repair and recombination proteins [BR:
sod03400
]
Sant_4082 (polA)
Enzymes [BR:
sod01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Sant_4082 (polA)
DNA replication proteins [BR:
sod03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Sant_4082 (polA)
DNA repair and recombination proteins [BR:
sod03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Sant_4082 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Sant_4082 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AHF79038
UniProt:
W0I3P1
LinkDB
All DBs
Position
complement(4690119..4692905)
Genome browser
AA seq
928 aa
AA seq
DB search
MVQIAENPLILVDGSSYLYRAYHAFPPLTNSGGEPTGAMYGVLNMLKSLLVQYRPSHVAV
VFDAKGKTFRDELFEHYKSHRPPMPDDLRSQIAPLHEMVKAMGLPLLAISGVEADDVIGT
LALAAARDGRDVLISTGDKDMAQLVSPKITLINTMSNTILGPQEVQLKFGVPPELIIDYL
ALMGDSSDNIPGVPGVGEKTAQALLQGVGGLETLYQQLDSVSTLSFRGAKTMAAKLEQHR
EVAFLSYQLATIKTDVALDLPYDQLTVEEPEAEALMLLFQRYEFKRWLSDLEAGKWLQGR
KSAVAPPSPFTAPRPAAAEAPAEVLSKDGYQIIYDMATLEQWITAIRSAGVFAFDTETDG
LDTLTANLVGLCFAVKPGEAAYLPVGHDYLDAPDQLDRAAVLALLKPVLEDAAIGKIGQN
LKFDRGVLKRYDIELAGIAFDTMLESYVLDSVAGRHDMDSLADRFLQHTTVSFEEIAGKG
RNQLTFNQIALEQAAPYAAEDADVTLRLHQTLWPRIEQAPELKKVFQEIEMPLVPVLSRI
ERTGVLIDENILAAHSVELTKRLEALELEAHQLAEEPFNLSSTKQLQAILYDKQKLPVLK
KTPGGAPSTNEEVLAELALDYPLPKLILEYRGLAKLKSTYTDKLPQMINPVSKRVHTSYH
QAVTATGRLSSSDPNLQNIPVRNDEGRRIRQAFIAPPDALIVAADYSQIELRIMAHLSRD
PGLLNAFAAGKDIHRATAAEVFGMPLEKVTQDQRRSAKAINFGLIYGMSAFGLARQLSVP
RSEAQKYMNLYFERYPGVLDYMERTRRQANDQGYVATLDGRRLYLPDIHSRNGMRKKGAE
RAAINAPMQGTAADIIKRAMIAIDGWLQQEAPPVRMIMQVHDELVFEVQRDAVESAKARI
KALMEGCFTLDVPLQVDVGVGENWDQAH
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggttcaaatcgcagaaaacccgttaatcctggtggatggctcttcttatctttaccgc
gcctatcatgccttcccgccgctgaccaatagcgggggggaacccacgggggcgatgtac
ggcgtattgaatatgcttaaaagcctgctggtgcaataccgaccaagccatgtggcggtg
gtgtttgatgccaagggcaagacctttcgcgatgaattgtttgagcactacaaatcccac
cggccgcccatgccggacgatctgcgcagccagatagcgccgctgcatgagatggtcaag
gcgatggggctgccactgctggctatcagcggcgtagaggccgatgatgttatcggtacg
ctggcgctggcggcggcgcgcgacggccgcgacgtgctgataagcaccggtgataaagac
atggcgcagctagtgtcgcccaaaattaccctgatcaataccatgtcgaacaccatcctc
ggtccgcaagaggtgcagttgaaattcggcgtgccgccggagcttatcatcgactatctg
gcgctcatgggcgatagctcggataatattccgggcgtgccgggagtcggggagaaaacc
gcgcaggcgctattgcagggagtaggggggctggaaaccctgtatcaacagcttgatagc
gtcagcaccttgagcttccgcggcgccaaaaccatggccgccaaactcgagcagcaccgc
gaggtggctttcctttcctaccagttggcgacgattaaaaccgatgtggcgctggattta
ccctatgatcagctaacggttgaagagcccgaggccgaagcgctgatgctgttgtttcag
cgttatgaatttaaacgctggttgagcgacctagaagcgggtaaatggctacagggccgc
aaaagcgccgtcgcgccgccttcgccctttaccgcgcctcgcccggccgcagcggaggcg
ccggctgaggtactgtcaaaagacggctatcagatcatttacgacatggcgacgcttgag
cagtggattaccgctattcgcagcgccggcgtgttcgccttcgataccgaaaccgatggg
ctggatacgctgaccgccaatttggtggggctgtgctttgccgtgaaaccgggtgaagct
gcctacctgccggtggggcatgactatctggatgcgccggaccagcttgaccgcgcggcg
gtactggcattgttgaaaccggtgctggaagatgccgccatcggcaaaatcggccagaac
ctcaaattcgaccgcggggtattgaaacgatacgacattgagttggccggcatcgcattc
gataccatgctggaatcctacgtgctggacagcgtcgccggccgccacgatatggacagc
ctggcggatcgttttttacaacacaccaccgtgagctttgaggagatcgcgggtaaaggg
cgcaaccagctgacgttcaaccagatcgctttggaacaggccgccccctacgccgccgaa
gacgccgatgtgacgctgcgtttgcatcagacgctgtggccgcgcattgagcaagcgccg
gagctgaaaaaagtctttcaggaaattgaaatgccgctggtgccggtcctgtcgcgcatt
gagcgcaccggcgtgcttattgacgaaaacattctcgccgcgcattcggtggagctgacc
aaacgtctggaagcgctggaactggaagcgcatcagctggctgaagaaccgttcaatctt
tcctctaccaaacagctgcaggcgattttatacgataaacagaaactgccggtgctgaaa
aaaacccccggcggtgccccttccaccaatgaagaggtgctggcggagctggcgctggat
tatccgctgccgaagctgattttggaataccgcggcctggccaagcttaaatccacctac
accgataaactaccgcagatgatcaacccggtgtcgaaacgggtgcatacctcctatcat
caggccgttaccgctaccggacgactatcttcgagcgatccgaacctgcaaaatattccg
gtgcgtaatgatgagggacggcgtatacgccaggcatttatcgcgccgccggatgcgctt
atcgtggcggcggactattcgcagattgagctgcgcatcatggcgcatctctcgcgcgat
cccggattgctgaacgcctttgccgccggcaaggatattcaccgcgccaccgccgccgag
gtcttcgggatgccgttggagaaggtgacacaggatcagcgccgcagcgccaaggctatc
aactttggcctgatttacggcatgagcgcctttggtctggcgcgtcagctgtcggtgccg
cgttcggaggcgcagaaatatatgaatctttatttcgagcgctaccccggcgttttggac
tatatggaacgcacccgcaggcaggcgaacgatcaaggttatgtcgccaccctggacggg
cgccggctttatttgccggatattcactcgcgcaacggcatgcgcaagaaaggcgcggag
cgcgcggccattaatgcgcctatgcagggcaccgccgccgatatcatcaaacgggcgatg
attgcgatcgatggctggttgcagcaggaggcgccgccggttcgcatgattatgcaggtt
catgatgaattggtgtttgaggtgcaaagggatgcggtagagagcgccaaagcgcggatt
aaggcgctgatggagggatgttttacgctggatgtaccgttgcaggtggacgtgggggtc
ggtgaaaactgggatcaagctcactaa
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