Spinacia oleracea (spinach): 110774820
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Entry
110774820 CDS
T05137
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 17 isoform X1
KO
K14806
ATP-dependent RNA helicase DDX31/DBP7 [EC:
5.6.2.7
]
Organism
soe
Spinacia oleracea (spinach)
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
soe01009
]
110774820
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
soe03009
]
110774820
Enzymes [BR:
soe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110774820
Protein phosphatases and associated proteins [BR:
soe01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
110774820
Ribosome biogenesis [BR:
soe03009
]
Eukaryotic type
Pre-60S particles
Helicases
110774820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
UvrD-helicase
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
110774820
NCBI-ProteinID:
XP_021835101
UniProt:
A0A9R0HQP4
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All DBs
Position
2:15699593..15710509
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AA seq
618 aa
AA seq
DB search
MKITENTKMKITQKNSNQKQQNSDDEIFASCSFSSLGLDSSLCDQLKERLGFETPTQVQA
KAIPVILSGSHVLVNAATGTGKTIAYLAPIIHHLQKYEPRIQRVDGTFALVLVPTHELCM
QVYETLQKLLHRFHWIVPGYIMGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLY
TNLRWLIFDEADRTLELGFGKEVEEILSIFSSRQSRTNDKESGNFRIFEFERQNLLLSAT
LNDKVNHLAQISLENPIMIGLGEREPHQNPSSKHSGSVGSEEEELEQSGTVKDSSTGDYN
LPSQLTQRYVKVPCGSRLAVLLSILKNLFEREATQKVVVFFSTRDAVDFHYKLLKEFQWP
PNVAKETKGRRLFMNCKTFPLHGSMENKERTSSISSFKAEKSALLLSTDVLARGVDIPKV
SYIIQYDPPGEATEYVHRVGRTARLGRKGDALLFLQPVEKGYLDELEKHGVSLTEYPLQK
VLDSLPLYGQKHLARKFVAIEMHPWLLDLQMALEDFIYAESKLKTMAKDAFVSWVRGYTT
HKLELKTIFMKKNLHLGHVAKSFALRDQPSLVGKSVHQQIKKRMKSEQINKKRKKSEQQK
QKQKQTGQRKKRKVAVTT
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataactgaaaacacaaaaatgaagattacccagaaaaattcaaaccaaaagcag
caaaattccgacgacgaaatcttcgcttcatgctcattctccagcctcggcctcgattct
tccttgtgcgaccaactcaaagagaggttgggtttcgaaactccgactcaagtgcaagct
aaagcaattcctgttatactctctggcagccatgtacttgttaatgcggcaactggaact
ggcaaaactattgcttatttggcaccgattattcatcacttgcagaagtacgaacctcga
attcagagggttgatggtacttttgccttggtacttgtaccaacgcatgagttatgcatg
caggtgtatgaaactctgcaaaagctactgcaccgatttcattggattgtcccaggatac
ataatgggaggtgaaagtaggtcaaaagaaaaggcgaggttgcgaaaaggtatatctata
cttgttgcaactcctggccgtcttttggatcacttaaagaatacatcatcattcttgtat
actaatttgcgctggttaatttttgatgaagcagataggacactagaattagggtttggt
aaagaagttgaagaaattcttagtatttttagctcaaggcaaagcagaactaatgataaa
gaaagtgggaactttagaatttttgagtttgaaaggcagaatctgctcttatctgctacc
ttaaatgacaaggtcaatcatcttgctcaaattagtctagaaaatcccattatgatcggt
cttggtgaaagggagccccatcaaaatccatcttccaagcattctgggtctgtaggatct
gaggaggaagaattagaacaaagtgggacagttaaagactcctcaactggagattacaac
ctcccctctcaacttactcagagatatgtgaaagtgccttgtggttcacggctggcagtt
cttctttctattctcaagaatctttttgaacgagaagctacccaaaaggttgtagtcttc
ttctcgactcgtgatgctgtggacttccactacaaacttctaaaggagttccagtggccg
ccaaatgttgcaaaagaaactaaggggaggcgtctttttatgaactgcaaaaccttcccc
ttacatgggagcatggagaacaaagagcgaacaagttcaatttcttccttcaaagcagaa
aaatctgctctactcctatctactgatgttttggcgagaggcgtggacatccctaaagtt
agctatattatacaatatgatcctcctggagaggccactgaatatgttcatagggttgga
agaacagctcgcttgggccggaagggagatgcattattgtttctacagcccgttgaaaag
ggctatttggatgagttggaaaaacatggtgtatcattaacagagtatccacttcaaaag
gtgttggatagcttaccattgtatggtcaaaagcaccttgcgaggaagtttgttgcaatt
gagatgcatccctggttattagatctacagatggctctcgaggactttatttatgctgag
tcaaagttgaagacgatggcaaaggatgcatttgtttcttgggtgcgaggatacacaacc
cataaactagaactaaaaaccatattcatgaagaagaacctccatttgggtcatgttgct
aaaagttttgctcttagagaccagccctctttggtagggaaatcggtacaccagcagata
aaaaagaggatgaaaagcgagcagataaataaaaagaggaagaagagtgagcaacagaag
cagaagcagaaacagacaggacagcggaagaagagaaaggtcgctgttacaacataa
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