KEGG   Spinacia oleracea (spinach): 110775426
Entry
110775426         CDS       T05137                                 
Name
(RefSeq) pre-mRNA-splicing factor 38
  KO
K12849  pre-mRNA-splicing factor 38A
Organism
soe  Spinacia oleracea (spinach)
Pathway
soe03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:soe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110775426
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:soe03041]
    110775426
Spliceosome [BR:soe03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    110775426
SSDB
Motif
Pfam: PRP38 PRP38_assoc HIND
Other DBs
NCBI-GeneID: 110775426
NCBI-ProteinID: XP_021835718
UniProt: A0A9R0JID2
LinkDB
Position
4:complement(17288127..17293429)
AA seq 378 aa
MANRTDPLAKSIRGTNPQNLVEKIVRSKIYQNTYWKEQCFGLTAETLVDKAMELDHVGGT
YGGNRKPSPFMCLVMKMLQIQPEKDIVVEFIKNEDYKYVRILGAFYLRLTGTDSDIYLYL
EPLYNDYRKLRMRKPDGQYLLTHVDEFIDELLTKDYSCDIAMPRIKKRWNLENIGALEPR
RSALEDDFEEEEEKEEDEMDVDVDEHEKDYRRSPVRDKDRRRDSHRHRDYDRDYDRDYER
ERGRGRDRDRDKDRDRDRDRDRDYRDRDRDRDRYRIRDEKDYGRDRDRDRDRRDRDRGRR
RSRSRSPDRNDRDGDRKRHGRSPSPRRHGDEDNGAREESKKKKKGKKEKKDDGTDHPDPE
IAAANKLRAELGLKPLQL
NT seq 1137 nt   +upstreamnt  +downstreamnt
atggcgaatcgaacagacccactagcaaagagtataaggggaacgaacccacaaaatttg
gtcgaaaagatagttcgatcgaaaatctaccaaaacacctactggaaagaacaatgcttc
ggtctcaccgccgaaactctcgtcgacaaggccatggagctcgaccatgtgggtggcact
tacggtggtaatcgcaaaccttctccattcatgtgtcttgtcatgaagatgctacagatt
caacccgagaaagatatcgtcgttgagttcatcaaaaacgaagattataagtatgtgagg
atacttggggcgttctatttacgtcttacaggaacggattccgatatctacttgtaccta
gagccattgtacaatgattaccgaaagctgcgtatgaggaagccggatgggcagtatttg
ctgactcatgtggacgagttcattgatgaacttctgacgaaagactattcatgcgacatt
gccatgccccgtattaagaagagatggaatcttgagaacattggtgctctagaacccaga
agaagtgccctagaagatgatttcgaggaggaggaagaaaaggaagaagatgagatggat
gtagatgttgatgaacatgaaaaggattatcgcaggagtcctgtgagagacaaggatagg
agacgtgatagtcacagacacagggactatgaccgtgattatgaccgtgattatgagaga
gaacgtggaagagggcgagatcgagatcgagacaaggatagggatagggaccgggaccga
gatagagattaccgagacagggatcgagaccgagatcgttatcgcatcagagatgaaaaa
gattatggtcgtgatagggatagggatagggataggcgtgacagggatcgtggtaggcga
aggagtcggagtaggagtccggatcgcaatgaccgtgatggtgaccgtaagaggcatggt
aggagtccgagtcccagaaggcatggagatgaggataatggtgcacgagaggagtctaag
aagaagaagaaagggaagaaggagaagaaggatgatggcacagaccatcctgatccagaa
attgctgcagctaacaaacttcgtgctgaacttgggttgaaaccgttgcagttatag

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