Spinacia oleracea (spinach): 110775426
Help
Entry
110775426 CDS
T05137
Name
(RefSeq) pre-mRNA-splicing factor 38
KO
K12849
pre-mRNA-splicing factor 38A
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110775426
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
soe03041
]
110775426
Spliceosome [BR:
soe03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
110775426
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
HIND
Motif
Other DBs
NCBI-GeneID:
110775426
NCBI-ProteinID:
XP_021835718
UniProt:
A0A9R0JID2
LinkDB
All DBs
Position
4:complement(17288127..17293429)
Genome browser
AA seq
378 aa
AA seq
DB search
MANRTDPLAKSIRGTNPQNLVEKIVRSKIYQNTYWKEQCFGLTAETLVDKAMELDHVGGT
YGGNRKPSPFMCLVMKMLQIQPEKDIVVEFIKNEDYKYVRILGAFYLRLTGTDSDIYLYL
EPLYNDYRKLRMRKPDGQYLLTHVDEFIDELLTKDYSCDIAMPRIKKRWNLENIGALEPR
RSALEDDFEEEEEKEEDEMDVDVDEHEKDYRRSPVRDKDRRRDSHRHRDYDRDYDRDYER
ERGRGRDRDRDKDRDRDRDRDRDYRDRDRDRDRYRIRDEKDYGRDRDRDRDRRDRDRGRR
RSRSRSPDRNDRDGDRKRHGRSPSPRRHGDEDNGAREESKKKKKGKKEKKDDGTDHPDPE
IAAANKLRAELGLKPLQL
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatcgaacagacccactagcaaagagtataaggggaacgaacccacaaaatttg
gtcgaaaagatagttcgatcgaaaatctaccaaaacacctactggaaagaacaatgcttc
ggtctcaccgccgaaactctcgtcgacaaggccatggagctcgaccatgtgggtggcact
tacggtggtaatcgcaaaccttctccattcatgtgtcttgtcatgaagatgctacagatt
caacccgagaaagatatcgtcgttgagttcatcaaaaacgaagattataagtatgtgagg
atacttggggcgttctatttacgtcttacaggaacggattccgatatctacttgtaccta
gagccattgtacaatgattaccgaaagctgcgtatgaggaagccggatgggcagtatttg
ctgactcatgtggacgagttcattgatgaacttctgacgaaagactattcatgcgacatt
gccatgccccgtattaagaagagatggaatcttgagaacattggtgctctagaacccaga
agaagtgccctagaagatgatttcgaggaggaggaagaaaaggaagaagatgagatggat
gtagatgttgatgaacatgaaaaggattatcgcaggagtcctgtgagagacaaggatagg
agacgtgatagtcacagacacagggactatgaccgtgattatgaccgtgattatgagaga
gaacgtggaagagggcgagatcgagatcgagacaaggatagggatagggaccgggaccga
gatagagattaccgagacagggatcgagaccgagatcgttatcgcatcagagatgaaaaa
gattatggtcgtgatagggatagggatagggataggcgtgacagggatcgtggtaggcga
aggagtcggagtaggagtccggatcgcaatgaccgtgatggtgaccgtaagaggcatggt
aggagtccgagtcccagaaggcatggagatgaggataatggtgcacgagaggagtctaag
aagaagaagaaagggaagaaggagaagaaggatgatggcacagaccatcctgatccagaa
attgctgcagctaacaaacttcgtgctgaacttgggttgaaaccgttgcagttatag
DBGET
integrated database retrieval system