KEGG   Spinacia oleracea (spinach): 110775715
Entry
110775715         CDS       T05137                                 
Name
(RefSeq) suppressor of mec-8 and unc-52 protein homolog 1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
soe  Spinacia oleracea (spinach)
Brite
KEGG Orthology (KO) [BR:soe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:soe03041]
    110775715
Spliceosome [BR:soe03041]
 Complex B
  Other components
   Complex B specific factors
    110775715
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_EML LisH_TPL WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_NWD2_C Beta-prop_IFT122_1st Beta-prop_DCAF4 Beta-prop_RIG_2nd Ge1_WD40 Beta-prop_Nup120_160 Beta-prop_IFT140_1st Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_NUP159_NUP214 Beta-prop_Vps41 Beta-prop_WDR35_TULP_N Beta-prop_VPS8 Beta-prop_EIPR1 Beta-prop_SPT8 Beta-prop_WDR75_2nd VPS8_N Beta-prop_HPS5 DUF7165 Mala_s_1-like Beta-prop_LRRK2 PALB2_WD40 zf_topless
Other DBs
NCBI-GeneID: 110775715
NCBI-ProteinID: XP_021836015
UniProt: A0A9R0HSS1
LinkDB
Position
4:complement(10160163..10175764)
AA seq 513 aa
MSTLEIEARDVIKIVLQFCKENSLNQTFQTLQSECQVSLNTVDSHETFIADVNSGRWDAV
LPQVSQLKLPRKKLEDLYEQIVLEMIELRELDTARAVLRQTQVMGVMKQEQPERYLRMEH
LLVRTYFDPHEAYQDSTKERRRAQIAQALSSEVSVVPPSRLMALIGQALKWQQHQGLLPP
GTQFDLFRGTAAMKQDVEDMYPTTLTHTIKFGKKSHPECARFSPDGQFLVSCSVDGFVEV
WDHVSGKLKKDLQYQADETFMMHEEAVLCADFSRDSEMLASGSQDGKIKVWRIRTGQCLR
RLERAHSMGVTSLCFSRDGSQILSTSFDSTARVHGLKSGKLLKEFRGHTSYVNHAIFTHD
GSRVITASSDCTVKVWDVKTTECLQTFKPPPPLRGGDASVNSVHLFPKNMDHVVVCNKTS
SVYIMTLQGQVVKSFSSGKREGGDFAAASVSPKGEWIYCVGEDRNLYCFSQQSGKLEHLM
KVHEKDVIGVTHHPHINLVATYGEDCTMKLWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtcaactcttgaaattgaagctcgagatgtgattaagatagtgcttcaattctgcaaa
gaaaattcgctgaatcaaacatttcaaacactacaaagcgaatgtcaggtgtctttgaac
acagtggatagtcatgagacattcattgcagatgttaatagtgggaggtgggatgctgtt
ttgcctcaagtttctcaacttaagcttcctaggaagaaattagaggatttgtatgagcag
attgttttagaaatgatcgagcttcgagaattggacactgcccgagcggttctgaggcaa
acccaggtaatgggtgtgatgaagcaagagcaaccagaaaggtacttgcggatggagcat
cttcttgtccggacctattttgatccacatgaggcgtatcaagattcaactaaagaacga
cgacgtgcgcagattgcacaagctctttcgtcagaagtttctgttgtgccaccgtcacga
ttgatggctttgattgggcaagctttgaagtggcaacagcatcaaggtttacttcctccc
ggaacacagtttgatttatttcgtggaactgctgcgatgaaacaagatgtcgaggatatg
tatcctacaacacttacacatactattaagttcgggaagaaaagtcacccagaatgtgct
aggttttctcctgatgggcagttcctggtttcttgctctgttgacggatttgttgaggta
tgggatcacgttagtgggaagctcaagaaagatctgcagtaccaggctgatgagacgttt
atgatgcatgaggaagctgtcctttgtgctgattttagtagagattcagagatgcttgcg
tccggttctcaagatggaaagatcaaagtgtggcgtataaggactggtcagtgtttgcga
cgcctcgaacgtgctcattctatgggagttacaagtctttgcttttctcgagatggaagt
cagatattgagtacatcttttgacagcactgcaagggttcatggtttgaagtctgggaag
ttgttaaaggaattccgtgggcatacttcttatgtaaatcatgcaatatttacacatgat
ggtagccgtgtgatcacagcatctagtgattgcacagtcaaggtttgggatgtcaagaca
accgagtgtctacagacgtttaaaccaccaccgcctttaaggggtggagatgcttctgta
aattctgttcatttgtttcccaaaaatatggatcacgttgttgtttgcaacaagacatca
tctgtatacatcatgacactccaaggacaggtcgtgaagagtttttcttctggtaagaga
gaaggcggagactttgcggctgccagtgtatcaccaaaaggagagtggatttactgtgtt
ggtgaagacaggaatttatattgtttcagtcagcagtctggtaaacttgaacatctgatg
aaggtgcacgagaaagatgtaatcggtgtgacacaccatcctcacataaacctcgttgct
acctatggtgaagactgcaccatgaaattatggaagccttga

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