Spinacia oleracea (spinach): 110775800
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Entry
110775800 CDS
T05137
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
soe
Spinacia oleracea (spinach)
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
soe01009
]
110775800
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
soe03021
]
110775800
Enzymes [BR:
soe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
110775800
Protein phosphatases and associated proteins [BR:
soe01009
]
HAD phosphatases
Fcp/Scp phosphatases
110775800
Transcription machinery [BR:
soe03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
110775800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
110775800
NCBI-ProteinID:
XP_056683061
LinkDB
All DBs
Position
4:6797602..6805997
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AA seq
735 aa
AA seq
DB search
MDEDRIISVAEAVHKLQLALLDGIEDDSQLFAAGTLMCRGDYVDVVTERTIANLCGYPLC
PNSLPAELPKKGQYRISMKEHKVYDLHETNLYCCSSCLINSKAFAGSLPEERCSALNPAK
VNEILRLFNNVGLEDEEEGKGKNVESVLSKLTIKENAETKGGEVSIEEWIGASNSIEGYV
PQRDRHLHPSVSEASKKGSEPGNAKLNKHNDAVQNGSDFEVTVTKSVEGIVGSREVLKND
ENIPLNHSEIMEPLLSDVNFTSMIITNDEYSAPKKLEGGSKSGLSGAKQGSKAKNSVTTK
GKDSFFGSVDFTSVIITQEDYSVSKLPSSQVISDPDQMSQEFSEKLDLGDNALQRSTDLV
SIGAENNVDQNASLAEVYFHHDQNGATSSSRHVKDEAHSEKVIHSSLSKGKSSLRNSGVK
KLARSVTWADSDLAGGNLCEFREFENTKEGPSTSRSNEAGENDGSERFASAEACAMALIQ
AAEAVASGQSDANDAVSEAGILVLPQPETADKGEQSVKDDALEEDLAPEKWPKKPGNLNY
DFFDSDQSWFDNSPEGFNLTLSPFALMWNALFSWLTSSSLAYIYGRDESVHEEYMFTNGR
EYPNKIVLPDGRSREIKQTLAGSLARALPELIADLKLPTPVSTLEREVSCLLDTMTFMDA
LPPLRMKQWQVISLLFIDALSVCRVPGLSAYLTSRRILIPKVLNGAQVSAEEYEIMKDFV
IPLGRVPQFTMQSGG
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagataggataatatcggtagctgaagcagtgcataaactgcagcttgcactt
cttgatggtattgaagatgatagtcagctttttgctgctgggactcttatgtgtaggggt
gactatgtagatgtagtgacagagagaacgattgctaacctatgtggttatcctttgtgc
ccgaattctctgcctgcagaactccctaaaaaggggcagtaccgtatttcgatgaaggag
cacaaggtgtatgatcttcatgagaccaatttgtattgttgttctagttgtttgatcaat
agtaaggcgtttgctggtagtttaccggaggagagatgttcggcattgaaccctgccaag
gttaatgagatattgaggttgtttaataatgtgggtttggaagatgaggaagagggaaag
gggaagaatgtggaatcggtgttgtcaaaattgacgattaaggagaatgctgagacgaaa
ggaggggaagtttctattgaggagtggattggtgcatcgaattccatcgaaggatatgtc
ccccaaagagatcgtcacttgcatccatcagtatcggaagcttctaaaaaaggatctgaa
ccaggtaatgccaagttgaataagcacaatgatgcagttcaaaatgggtctgactttgag
gttactgttactaaatccgttgaaggtatagtgggttctagagaggttctgaaaaatgat
gagaatatcccgcttaatcattcagaaatcatggaacctttgctcagcgatgtgaacttc
acaagtatgattataaccaatgatgaatattctgctcctaagaagttagaaggtggttcc
aagtctgggctttctggagccaaacaaggctctaaagcaaagaactctgtcacaacaaag
ggcaaagattctttctttgggagtgtagactttacgagcgtcataattacacaagaggat
tacagtgtctccaaattaccttccagtcaagtcatatccgatccagatcaaatgtctcaa
gaattctctgaaaaactggatcttggtgacaacgctcttcagagatctacagatttagtt
tccataggggctgaaaataatgtagatcagaatgcaagcttagccgaagtttattttcac
catgatcagaatggtgccacttcaagtagcaggcatgtgaaagacgaggctcattctgag
aaggttattcactctagtctatcgaaaggcaaatcttctctaagaaactctggggtaaag
aaacttgcacgttctgtaacgtgggctgacagtgatcttgctggtggaaatctctgtgag
ttcagagaatttgaaaacacaaaagaaggtcccagtacttcaagaagcaacgaggcaggg
gaaaatgatggttccgaacggtttgcctctgctgaagcttgtgcgatggcattaatccag
gcagctgaagctgttgcatccggacaatcggatgctaatgatgctgtttctgaggctgga
atcttagtactgccacagccggaaacagcagataaaggggaacaatccgttaaagatgat
gcattggaggaggacttagctcctgaaaagtggcctaagaagccaggaaacttaaattat
gatttctttgactctgatcaatcatggtttgataattctccagaaggattcaacttgacg
ttgtcaccttttgccttgatgtggaatgctcttttttcttggctgacatcctcctcgctg
gcttatatatatggaagagatgagagtgtccatgaagagtatatgttcaccaatggaaga
gaatatcccaataaaatagtgcttcctgatggccgttctcgagaaatcaagcaaacatta
gctggctctcttgcacgagcattgcctgaactgattgctgatctcaaactgccaacacca
gtatccactttggagcgtgaagtgtcctgcttgctggacacgatgacttttatggatgca
cttcctccacttagaatgaagcaatggcaagtaatttctcttctgttcattgatgctctt
tctgtctgtagggttcctggactatctgcatacttgacaagcaggaggattttgattccc
aaggtcttaaatggtgcccaggtaagtgccgaagagtacgagatcatgaaagatttcgtg
attccactaggccgtgtgcctcagttcacaatgcagagcggtggttga
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