Spinacia oleracea (spinach): 110775856
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Entry
110775856 CDS
T05137
Name
(RefSeq) THO complex subunit 3
KO
K12880
THO complex subunit 3
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03013
Nucleocytoplasmic transport
soe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110775856
09122 Translation
03013 Nucleocytoplasmic transport
110775856
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soe03019
]
110775856
03041 Spliceosome [BR:
soe03041
]
110775856
Messenger RNA biogenesis [BR:
soe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
110775856
Spliceosome [BR:
soe03041
]
Complex C
Other components
EJC/TREX
110775856
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
110775856
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
Beta-prop_WDR3_1st
Beta-prop_EML_2
EIF3I
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WD40_Gbeta
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Beta-prop_NOL10_N
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
Beta-prop_Vps41
DSE1_N
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_WDR35_TULP_N
eIF2A
WD40_RFWD3
Beta-prop_DCAF12
Beta-prop_HPS5
Beta-prop_EML
Beta-prop_IFT140_1st
Tricorn_2nd
WD40_MABP1-WDR62_1st
TRM82_WD
PAC11
WDR90_beta-prop_4th
Beta-prop_NUP159_NUP214
CFAP251_N
Beta-prop_WDR41
Beta-prop_Nup120_160
WD_LRWD1
PROPPIN
DUF7099
Beta-prop_WDR11_1st
Beta-prop_NWD2_C
PD40
Motif
Other DBs
NCBI-GeneID:
110775856
NCBI-ProteinID:
XP_021836142
UniProt:
A0A9R0HSE3
LinkDB
All DBs
Position
2:complement(3924918..3933498)
Genome browser
AA seq
319 aa
AA seq
DB search
MAEQKTEEATHPFKNLCSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHSHG
KAKDTEFKGHTDSVDQLCWDPKHADLLATASGDKTVRLWDVRSGKCTQQAELSGENINIT
YKPDGAHIAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWDMTGEKFFLTTGNGTVEV
LAYPSLKALDTLTAHTAGCYCIAIDPLGRYFAVGSADSLVSLWDIKEMLCVRTFVKLEWP
VRTISFNHTGEYIASASEDLFIDISSIETGRSTHQIPCRAAMNSVEWNPKSNLLAYAGDD
KNKYQTDEGVFRIFGFQNA
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcagaaaactgaggaagcaacacacccatttaagaatctatgcagcagagaa
taccagggtcacaaaaagaaggtgcattcagtggcttggaattgtacggggacgaagctc
gcttcaggatcggttgatcaaacggctcgagtttggcacattgaacctcatagtcatggc
aaggcaaaagatactgaatttaaggggcacactgatagtgtggaccagctctgttgggat
cccaaacacgcagatctacttgcaacagcatcaggggataaaacagttcgtttgtgggat
gttcgtagtgggaagtgcacacagcaagcagaacttagtggtgaaaatatcaacattaca
tataaacctgatggggcacacattgctgttggaaacagggatgatgaactaacaattctg
gatgttagaaaatttaagccgattcacaggcgcaagttcaattatgaggtaaatgagatt
gcatgggacatgactggagagaagttctttctgacaactggaaatggtactgtcgaagtc
cttgcatacccctcgttgaaggcacttgacacccttaccgctcacactgctggttgttat
tgcattgcaattgatccactaggaagatattttgctgttggaagcgccgactcgttggtc
agtctttgggacattaaagagatgctatgtgtacgaacgtttgtgaaactcgaatggcct
gtccgaacaataagtttcaatcacactggagagtatattgcttcagccagtgaagattta
tttattgatatatcaagtattgaaactggacgatccacccaccaaataccttgtcgggca
gcaatgaatagtgttgaatggaatcccaagtccaacttgcttgcatatgctggagatgac
aaaaacaaataccaaacagatgaaggtgttttccgcatatttggtttccagaatgcttag
DBGET
integrated database retrieval system